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hypothetical_protein

Euk-Vir

Urbanus_proteus_nucleopolyhedrovirus

hypothetical_protein__YP_009250024__Urbanus_proteus_nucleopolyhedrovirus__1675866

Identity

Accession:
YP_009250024 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

83.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Urbanus_proteus_nucleopolyhedrovirus

TaxID: 1675866

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-78
PDB
Domain cluster: rep: hypothetical_protein_PsunGV_gp175__YP_003422514__Pseudalatia_unipuncta_granulovirus__36355__D13-66
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 45.0 4.50e-01 76.8% 64.4%
3rauA00 1.25.40.280 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains 0.68 50.0 3.03e-01 78.6% 46.6%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 44.0 4.34e-01 82.1% 62.9%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 4.14e-01 83.9% 51.9%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 46.0 4.50e-01 76.8% 87.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 46.0 4.15e-01 76.8% 78.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.64 42.0 4.41e-01 75.0% 72.5%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 43.0 4.04e-01 71.4% 55.7%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.42e-01 76.8% 98.5%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 43.0 3.86e-01 71.4% 87.3%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.62e-01 76.8% 100.0%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 44.0 4.07e-01 71.4% 90.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.84e-01 82.1% 89.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 46.0 4.55e-01 78.6% 89.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.72e-01 80.4% 84.3%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 43.0 2.75e-01 75.0% 30.1%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 51.0 3.05e-01 91.1% 34.1%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.62 46.0 4.78e-01 83.9% 84.6%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 42.0 4.17e-01 73.2% 70.5%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 40.0 4.07e-01 71.4% 66.7%
4pqdA00 3.90.570.10 Alpha Beta › Alpha-Beta Complex › Sugar Binding Protein, Amyloid A4 Protein; Chain A › Amyloidogenic glycoprotein, heparin-binding domain 0.61 43.0 3.54e-01 73.2% 89.5%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 50.0 3.01e-01 91.1% 34.1%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 46.0 4.46e-01 82.1% 96.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.11e-01 78.6% 76.4%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 42.0 4.18e-01 76.8% 90.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.23e-01 85.7% 78.7%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 50.0 3.63e-01 96.4% 79.8%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 41.0 4.13e-01 75.0% 89.7%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 47.0 4.22e-01 87.5% 70.9%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 46.0 4.44e-01 85.7% 100.0%
3f8dA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 3.80e-01 92.9% 69.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.12e-01 83.9% 95.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 4.11e-01 78.6% 85.9%
5yhgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 40.0 2.57e-01 71.4% 63.0%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 4.13e-01 83.9% 97.3%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 41.0 2.59e-01 75.0% 35.1%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 4.27e-01 78.6% 100.0%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 3.71e-01 83.9% 54.2%
6psyA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 47.0 3.20e-01 94.6% 98.7%
4oevA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 39.0 2.84e-01 71.4% 40.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 4.08e-01 91.1% 86.3%
1xocA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 39.0 2.82e-01 71.4% 41.9%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.91e-01 92.9% 100.0%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.54e-01 92.9% 53.0%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.31e-01 96.4% 100.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 3.81e-01 91.1% 72.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.51e-01 89.3% 47.9%
1cjaA01 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.56 39.0 2.98e-01 76.8% 54.0%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 44.0 3.47e-01 96.4% 85.2%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 46.0 3.60e-01 100.0% 94.8%
4j0wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 43.0 2.70e-01 89.3% 70.0%
2ytyA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 39.0 3.47e-01 83.9% 83.0%
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.51 37.0 2.89e-01 82.1% 75.9%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928262 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 48.0 4.70e-01 71.4% 61.7%
3328618 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.73 48.0 5.49e-01 78.6% 95.0%
4171510 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 50.0 4.48e-01 82.1% 51.2%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.13e-01 75.0% 83.6%
3941320 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.70 49.0 4.44e-01 73.2% 69.3%
3633434 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 48.0 4.52e-01 76.8% 58.6%
3663761 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.27e-01 83.9% 72.4%
3373298 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 52.0 3.45e-01 85.7% 92.1%
4269256 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.68 48.0 4.71e-01 85.7% 70.0%
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.03e-01 78.6% 85.5%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 48.0 4.70e-01 75.0% 88.3%
3612184 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.53e-01 78.6% 68.3%
4947996 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 45.0 4.61e-01 71.4% 76.4%
4957484 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 51.0 4.22e-01 83.9% 63.0%
3921563 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 53.0 4.70e-01 87.5% 73.8%
4932460 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.66 46.0 4.41e-01 71.4% 96.8%
5080835 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 46.0 4.71e-01 75.0% 80.0%
4992873 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 46.0 4.61e-01 75.0% 79.3%
3429682 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.18e-01 75.0% 65.3%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 50.0 3.84e-01 85.7% 92.6%
5024595 4333.1.1.2 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C 0.65 55.0 3.47e-01 100.0% 48.4%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 48.0 4.36e-01 80.4% 70.7%
3227946 2.1.1.126 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 0.64 48.0 4.53e-01 78.6% 95.4%
3507664 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 45.0 4.48e-01 76.8% 90.0%
338 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.64 46.0 4.42e-01 76.8% 98.5%
3586203 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 46.0 4.46e-01 78.6% 90.8%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 44.0 4.09e-01 80.4% 56.0%
3625911 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 4.29e-01 75.0% 83.1%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 48.0 4.62e-01 82.1% 75.4%
3359784 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 49.0 4.65e-01 87.5% 72.3%
5002450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 45.0 4.59e-01 78.6% 78.2%
4937436 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.63 49.0 3.12e-01 85.7% 66.7%
3395948 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.63 46.0 4.73e-01 78.6% 87.3%
3558926 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 51.0 4.38e-01 91.1% 83.3%
4945673 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 4.35e-01 76.8% 96.9%
3515495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.35e-01 92.9% 75.8%
3671396 4.1.1.316 ↗ beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.62 49.0 4.52e-01 87.5% 75.3%
3501699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.51e-01 91.1% 91.3%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 43.0 3.87e-01 76.8% 63.5%
3547102 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 51.0 4.45e-01 92.9% 85.9%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 48.0 4.31e-01 87.5% 60.0%
3391556 4.1.1.384 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st 0.61 50.0 4.07e-01 89.3% 61.9%
3234947 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 43.0 4.15e-01 75.0% 83.1%
3619813 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 54.0 4.28e-01 100.0% 87.0%
4670334 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.61 45.0 4.32e-01 78.6% 100.0%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 46.0 4.25e-01 83.9% 76.0%
3222195 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 44.0 4.29e-01 80.4% 84.6%
3496659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.56e-01 82.1% 81.7%
4935682 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 44.0 4.46e-01 80.4% 81.8%
None — 0.59 42.0 2.53e-01 76.8% 34.7%
3407827 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 48.0 4.21e-01 91.1% 82.4%
5008404 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.58 43.0 4.67e-01 78.6% 100.0%
3407853 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 46.0 3.98e-01 91.1% 76.7%
3829614 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.57 41.0 2.50e-01 78.6% 41.4%
5064802 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 39.0 3.45e-01 73.2% 95.6%
5058682 2004.1.1.162 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.56 39.0 2.68e-01 75.0% 68.2%
3477236 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.55 45.0 2.52e-01 94.6% 48.3%
3178364 319.1.1.19 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 0.55 38.0 3.21e-01 75.0% 48.6%
3722095 223.1.1.21 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like 0.54 37.0 2.39e-01 73.2% 38.4%
3448058 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 42.0 2.66e-01 91.1% 96.2%
3618540 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 37.0 3.47e-01 76.8% 66.7%
3170424 319.1.1.19 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 0.52 39.0 3.40e-01 83.9% 76.7%
3373479 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 37.0 2.49e-01 82.1% 69.5%
3592754 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 40.0 3.28e-01 92.9% 89.9%
4933213 375.1.1.31 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.50 36.0 3.43e-01 80.4% 75.7%
4948153 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 36.0 3.44e-01 80.4% 71.4%