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hypothetical_protein

Euk-Vir

Hubei_sobemo-like_virus_43

hypothetical_protein__YP_009329959__Hubei_sobemo-like_virus_43__1923231

Identity

Accession:
YP_009329959 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

67.2 mean pLDDT

Taxonomy

Hubei_sobemo-like_virus_43

TaxID: 1923231

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 283-338
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009329993__Hubei_sobemo-like_virus_6__1923239__D297-350
D2 medium residues 100-192
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009329993__Hubei_sobemo-like_virus_6__1923239__D113-207
D3 medium residues 193-282
PDB
Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 71.0 6.45e-01 88.9% 89.7%
1mbmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 60.0 6.68e-01 85.6% 93.1%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 75.0 7.22e-01 96.7% 88.1%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 65.0 5.78e-01 82.2% 90.2%
1a7sA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 67.0 6.17e-01 85.6% 89.3%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 63.0 5.84e-01 82.2% 92.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 71.0 6.78e-01 95.6% 97.1%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 63.0 6.14e-01 83.3% 100.0%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 63.0 5.93e-01 83.3% 100.0%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 62.0 5.83e-01 82.2% 80.6%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 66.0 6.53e-01 90.0% 97.9%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 70.0 6.69e-01 96.7% 87.1%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 59.0 6.39e-01 88.9% 100.0%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 69.0 5.36e-01 98.9% 53.3%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 6.36e-01 97.8% 98.9%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 54.0 4.83e-01 86.7% 92.9%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 53.0 4.47e-01 86.7% 98.1%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 52.0 4.55e-01 85.6% 93.6%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 53.0 4.42e-01 87.8% 86.8%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 51.0 4.65e-01 84.4% 92.7%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 53.0 4.77e-01 87.8% 94.4%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 52.0 4.62e-01 85.6% 96.1%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 52.0 4.54e-01 86.7% 92.7%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 46.0 4.24e-01 77.8% 97.4%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 42.0 4.06e-01 70.0% 98.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 34.0 4.02e-01 81.1% 83.9%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 35.0 3.75e-01 84.4% 74.0%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 4.42e-01 96.7% 98.4%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 4.22e-01 92.2% 95.2%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.55 38.0 3.63e-01 72.2% 91.0%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.54 44.0 3.84e-01 90.0% 85.8%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 33.0 3.28e-01 86.7% 56.0%
2xetB00 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.53 41.0 4.22e-01 85.6% 90.9%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.53 43.0 3.31e-01 88.9% 60.2%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.89e-01 82.2% 92.4%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.52 34.0 3.63e-01 88.9% 77.2%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 32.0 3.33e-01 85.6% 68.8%
2y7bA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.65e-01 88.9% 94.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 28.0 3.38e-01 77.8% 86.8%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 32.0 3.69e-01 80.0% 90.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 79.0 5.47e-01 98.9% 38.2%
3969197 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 79.0 5.47e-01 97.8% 43.0%
3464880 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.86 79.0 5.87e-01 100.0% 51.2%
3280223 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.84 79.0 5.99e-01 100.0% 83.6%
4205419 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 77.0 5.58e-01 98.9% 78.7%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 77.0 6.99e-01 98.9% 84.3%
3462061 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.83 77.0 5.66e-01 98.9% 45.1%
2710030 1.1.5.12 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 0.83 77.0 5.84e-01 98.9% 48.2%
3434538 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 73.0 5.47e-01 98.9% 46.5%
1308507 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 73.0 5.64e-01 97.8% 47.6%
4934715 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 71.0 5.15e-01 96.7% 47.4%
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 67.0 5.45e-01 96.7% 83.3%
2779726 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.75 68.0 5.31e-01 98.9% 52.2%
4882551 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.70 64.0 5.39e-01 100.0% 64.4%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.68 49.0 4.41e-01 77.8% 90.0%
3910727 4.1.1.353 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 0.67 42.0 4.86e-01 85.6% 87.7%
5076889 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.67 53.0 4.69e-01 85.6% 94.0%
2429452 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.66 53.0 4.71e-01 87.8% 89.4%
3164932 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.66 50.0 4.52e-01 81.1% 64.8%
4222919 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.66 50.0 4.50e-01 81.1% 63.2%
4631894 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.65 47.0 4.40e-01 76.7% 61.7%
3977079 1.1.12.0 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.65 47.0 4.39e-01 76.7% 64.3%
4926888 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.65 51.0 4.57e-01 85.6% 95.4%
4157526 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.64 47.0 4.33e-01 76.7% 63.5%
3471771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 36.0 4.41e-01 80.0% 90.9%
3283665 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.63 47.0 3.88e-01 80.0% 83.0%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.61 33.0 4.11e-01 80.0% 92.0%
3801791 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 35.0 4.05e-01 83.3% 78.5%
3463181 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 36.0 4.00e-01 84.4% 74.3%
3828348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 34.0 3.92e-01 82.2% 76.9%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.60 33.0 3.79e-01 78.9% 73.8%
3393297 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 36.0 3.86e-01 85.6% 67.5%
3326132 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 34.0 3.88e-01 84.4% 76.9%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 32.0 3.78e-01 80.0% 76.7%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 35.0 3.69e-01 84.4% 65.0%
3592540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 34.0 3.92e-01 81.1% 83.3%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.58 31.0 3.86e-01 77.8% 88.5%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 35.0 3.93e-01 83.3% 80.0%
4055256 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 35.0 3.59e-01 84.4% 61.1%
3599325 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.56 46.0 3.90e-01 90.0% 74.7%
1283866 220.1.1.51 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP3_C 0.56 49.0 4.42e-01 96.7% 98.4%
3577505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 35.0 3.61e-01 85.6% 65.9%
4023915 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.55 46.0 4.25e-01 90.0% 98.3%
3614247 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 44.0 4.00e-01 87.8% 97.6%
3490216 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.55 45.0 4.01e-01 87.8% 90.4%
3467678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.27e-01 84.4% 51.8%
None — 0.55 39.0 3.34e-01 74.4% 94.6%
3719817 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 3.95e-01 88.9% 96.9%
3715477 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.54 46.0 4.07e-01 94.4% 85.2%
182106 220.1.1.46 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.54 44.0 3.79e-01 87.8% 90.6%
3926207 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 30.0 3.68e-01 75.6% 92.5%
3407827 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.53 33.0 3.45e-01 85.6% 65.9%
3392421 11.1.1.260 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 0.53 36.0 3.43e-01 70.0% 63.6%
3607724 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.53 42.0 3.74e-01 85.6% 90.0%
3884136 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 3.89e-01 92.2% 87.4%
3932851 220.1.1.46 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.53 43.0 3.93e-01 88.9% 97.5%
3508319 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 31.0 3.50e-01 78.9% 80.0%
3596066 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.84e-01 90.0% 92.0%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.52 35.0 3.97e-01 86.7% 96.9%
3342224 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 39.0 3.24e-01 81.1% 91.0%
3642679 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.50 41.0 3.87e-01 88.9% 97.2%