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hypothetical_protein
Euk-VirHubei_sobemo-like_virus_26
hypothetical_protein__YP_009329969__Hubei_sobemo-like_virus_26__1923212
Identity
- Accession:
- YP_009329969 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
63.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-178
D2
medium
residues 185-201_284-365_443-487
Domain cluster:
rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
D3
medium
residues 202-283
D4
medium
residues 504-553_628-644
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13894.13 | zf-C2H2_4 | 20.6 | 7.30e-04 | 35.8% | 100.0% |
| PF00096.33 best | zf-C2H2 | 24.1 | 5.10e-05 | 35.8% | 100.0% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6e94A02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.65 | 46.0 | 4.94e-01 | 74.6% | 92.9% |
| 1x6hA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 43.0 | 3.97e-01 | 74.6% | 61.6% |
| 3hcsA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 41.0 | 4.49e-01 | 74.6% | 100.0% |
| 2mdgA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 38.0 | 4.06e-01 | 74.6% | 85.5% |
| 2lv2A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 37.0 | 3.39e-01 | 70.1% | 57.6% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.53 | 44.0 | 2.77e-01 | 95.5% | 81.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395132 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.84 | 42.0 | 5.47e-01 | 74.6% | 85.0% |
| 3541818 | 386.1.1.58 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ZNF512_zf-C2H2 | 0.80 | 41.0 | 5.76e-01 | 71.6% | 100.0% |
| 3504875 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.75 | 38.0 | 3.77e-01 | 100.0% | 47.1% |
| 4560864 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.75 | 41.0 | 4.25e-01 | 74.6% | 56.9% |
| 3414000 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 48.0 | 5.43e-01 | 73.1% | 90.0% |
| 3778009 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.70 | 48.0 | 5.33e-01 | 71.6% | 100.0% |
| 3517430 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 39.0 | 4.01e-01 | 71.6% | 58.5% |
| 4366108 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.70 | 38.0 | 3.55e-01 | 100.0% | 45.6% |
| 3566826 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.69 | 38.0 | 4.37e-01 | 71.6% | 74.0% |
| 3870711 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.68 | 39.0 | 4.30e-01 | 100.0% | 70.9% |
| 3485009 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.65 | 46.0 | 4.54e-01 | 74.6% | 75.7% |
| 3747670 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 42.0 | 4.73e-01 | 70.1% | 96.0% |
| 3731208 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.61 | 44.0 | 3.86e-01 | 74.6% | 89.5% |
| 3566213 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 42.0 | 4.54e-01 | 71.6% | 98.2% |
| 3920268 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 43.0 | 4.25e-01 | 74.6% | 74.3% |
| 3894754 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 41.0 | 3.73e-01 | 71.6% | 67.7% |
| None | — | 0.60 | 43.0 | 4.67e-01 | 74.6% | 92.7% | |
| 3229225 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 38.0 | 4.24e-01 | 97.0% | 80.0% |
| 3849208 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.60 | 42.0 | 4.19e-01 | 74.6% | 70.0% |
| 3401049 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 43.0 | 4.23e-01 | 74.6% | 72.9% |
| 3397207 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 42.0 | 3.27e-01 | 73.1% | 33.8% |
| 3410995 | 386.1.1.264 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_jaz | 0.60 | 42.0 | 4.43e-01 | 73.1% | 85.0% |
| 3843041 | 386.1.1.234 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 | 0.60 | 42.0 | 3.78e-01 | 74.6% | 53.7% |
| 3627003 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.60 | 41.0 | 4.10e-01 | 73.1% | 74.3% |
| 3534206 | 386.1.1.392 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › C2H2_ASCIZ_4th | 0.59 | 41.0 | 4.18e-01 | 74.6% | 78.5% |
| 3990353 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 40.0 | 3.97e-01 | 70.1% | 72.9% |
| 3631889 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 36.0 | 4.20e-01 | 70.1% | 85.7% |
| 3623411 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 35.0 | 3.12e-01 | 73.1% | 41.1% |
| 3507035 | 386.1.1.242 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 | 0.58 | 40.0 | 4.21e-01 | 71.6% | 85.0% |
| 3903023 | 386.1.1.262 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_16 | 0.58 | 37.0 | 4.09e-01 | 97.0% | 80.0% |
| 3791983 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.58 | 40.0 | 4.35e-01 | 74.6% | 92.7% |
| 3203321 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.57 | 39.0 | 4.45e-01 | 71.6% | 96.0% |
| 3414376 | 386.1.1.238 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 | 0.56 | 39.0 | 3.58e-01 | 74.6% | 69.5% |
| 3525956 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.54 | 38.0 | 3.90e-01 | 74.6% | 78.5% |
| 3703547 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 38.0 | 3.63e-01 | 74.6% | 73.4% |
| 3791965 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 37.0 | 3.59e-01 | 74.6% | 64.6% |
| 3998067 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.52 | 42.0 | 3.94e-01 | 92.5% | 97.6% |