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hypothetical_protein

Euk-Vir

Beihai_sesarmid_crab_virus_4

hypothetical_protein__YP_009330275__Beihai_sesarmid_crab_virus_4__1922664

Identity

Accession:
YP_009330275 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

51.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 212-361
PDB
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bvxA02 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.65 40.0 4.53e-01 88.7% 82.0%
3t46A00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.62 31.0 4.14e-01 89.3% 94.7%
6a7hA01 1.20.140.180 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.61 29.0 3.14e-01 89.3% 50.8%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.54 35.0 3.74e-01 81.3% 75.6%
1l8qA03 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.53 33.0 3.81e-01 74.0% 86.0%
2gsqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 28.0 3.17e-01 84.7% 65.7%
1gpjA03 1.10.1200.70 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain 0.51 26.0 3.32e-01 82.7% 84.7%
5tj5E00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.50 33.0 3.49e-01 90.7% 72.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3440521 611.9.1.4 alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N 0.64 42.0 4.38e-01 90.7% 70.7%
3652902 4230.1.1.1 alpha arrays › DnaD domain › DnaD domain › DnaD domain › DSPc 0.58 26.0 3.66e-01 75.3% 88.6%
3624439 611.4.1.0 alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like 0.52 34.0 3.32e-01 88.7% 57.7%
3639325 133.1.1.1 alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.50 39.0 3.31e-01 80.7% 56.7%
D2 medium residues 14-77
PDB