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hypothetical_protein

Euk-Vir

Beihai_horseshoe_crab_virus_1

hypothetical_protein__YP_009333373__Beihai_horseshoe_crab_virus_1__1922392

Identity

Accession:
YP_009333373 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

50.1 mean pLDDT

Taxonomy

Beihai_horseshoe_crab_virus_1

TaxID: 1922392

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 283-333
PDB
Domain cluster: representative
D2 medium residues 348-413
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k0nA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.72 49.0 4.50e-01 71.2% 62.4%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.71 60.0 5.71e-01 93.9% 89.7%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.67 56.0 4.79e-01 98.5% 88.0%
5y6qB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.64 50.0 4.43e-01 95.5% 56.6%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 55.0 4.26e-01 95.5% 90.3%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.64 48.0 4.30e-01 81.8% 61.7%
4b4yA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 53.0 4.13e-01 95.5% 91.3%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 50.0 4.16e-01 93.9% 91.8%
2zs0A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 53.0 4.21e-01 97.0% 89.3%
5ojcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 51.0 3.96e-01 97.0% 87.0%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.59 46.0 4.02e-01 97.0% 53.2%
1oisA01 1.10.10.41 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 0.57 46.0 4.18e-01 92.4% 69.6%
1kxpD03 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.56 42.0 3.92e-01 84.8% 83.0%
2glzA00 3.30.1330.130 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.56 38.0 3.00e-01 87.9% 31.5%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 34.0 3.65e-01 84.8% 70.7%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.54 44.0 3.45e-01 95.5% 65.0%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.04e-01 89.4% 97.5%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.53 40.0 3.69e-01 84.8% 98.9%
3di2A00 1.20.1250.50 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 41.0 3.55e-01 92.4% 80.9%
3bvoA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.51 43.0 4.03e-01 97.0% 83.7%
1ya0A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 40.0 2.98e-01 92.4% 39.8%
4hteA03 1.10.167.30 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.51 35.0 3.36e-01 92.4% 60.0%
2jpnA00 1.20.1280.210 Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 0.51 42.0 4.05e-01 100.0% 83.5%
1vp7A00 1.10.287.1040 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit 0.51 35.0 3.49e-01 93.9% 70.6%
4ol8B03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 37.0 3.41e-01 80.3% 65.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3845878 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.78 68.0 6.57e-01 97.0% 92.0%
4235730 101.7.1.1 ↗ alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.73 59.0 6.10e-01 98.5% 100.0%
3607719 633.24.1.0 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain 0.71 59.0 5.48e-01 93.9% 87.1%
3261803 633.24.1.0 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain 0.70 58.0 5.43e-01 95.5% 91.8%
154767 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.63 53.0 4.13e-01 95.5% 91.3%
3927033 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.59 49.0 3.87e-01 97.0% 89.7%
3176307 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.58 47.0 3.85e-01 95.5% 86.4%
3222930 148.1.3.229 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7809 0.54 43.0 3.31e-01 90.9% 75.8%
3504389 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 43.0 4.09e-01 93.9% 75.0%
3591815 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.53 41.0 4.04e-01 89.4% 78.7%
3669782 604.22.1.0 ↗ alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain 0.53 43.0 4.20e-01 100.0% 92.0%
5032064 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.51 42.0 4.07e-01 97.0% 89.9%
D3 medium residues 414-589
PDB