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hypothetical_protein

Euk-Vir

Hubei_virga-like_virus_16

hypothetical_protein__YP_009336680__Hubei_virga-like_virus_16__1923331

Identity

Accession:: YP_009336680 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

85.2 mean pLDDT

Taxonomy

Hubei_virga-like_virus_16

TaxID: 1923331

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-117

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22532.3 best	WIV_dom	70.4	1.30e-19	62.9%	65.1%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3egyX00	3.30.572.10	Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain	0.68	45.0	3.16e-01	70.0%	96.6%
2ysiA01	2.20.70.10	Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; ›	0.66	30.0	4.17e-01	72.9%	93.9%
4paaA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.55	41.0	2.97e-01	85.7%	81.2%
3aqlA01	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.53	43.0	3.53e-01	92.9%	51.4%
4qarA00	3.40.50.1580	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain	0.52	42.0	3.16e-01	92.9%	93.3%
2p62A01	3.40.50.10620	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains	0.51	41.0	3.40e-01	97.1%	98.6%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3688598	3398.1.1.2 ↗	a/b three-layered sandwiches › STING C-terminal domain › STING C-terminal domain › STING C-terminal domain › prok_STING	0.59	48.0	3.87e-01	94.3%	82.7%
5018203	316.1.1.41 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036	0.58	44.0	3.15e-01	81.4%	65.7%
4889754	386.1.1.1 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2	0.58	31.0	3.34e-01	72.9%	61.7%
4859430	2004.1.1.16 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf	0.57	49.0	3.74e-01	100.0%	93.2%
2662362	2011.2.1.0 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like	0.53	42.0	3.18e-01	92.9%	94.9%
3506686	2484.1.1.36 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2	0.53	39.0	2.87e-01	81.4%	64.1%
5055632	2004.1.1.67 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA	0.53	42.0	3.10e-01	91.4%	77.6%
3950089	2011.2.1.1 ↗	a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1	0.52	43.0	2.86e-01	92.9%	83.9%
3196251	2005.1.1.0 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains	0.52	42.0	3.40e-01	92.9%	94.0%
3605429	7579.1.1.51 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF676	0.52	41.0	2.65e-01	88.6%	98.6%
4595001	2004.1.1.73 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1	0.52	43.0	3.33e-01	100.0%	62.8%
4198414	2003.1.5.51 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT	0.52	39.0	2.89e-01	85.7%	51.6%
3926416	1.1.1.19 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD	0.50	42.0	3.71e-01	98.6%	99.1%