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hypothetical_protein

Euk-Vir

Hubei_toti-like_virus_9

hypothetical_protein__YP_009336788__Hubei_toti-like_virus_9__1923320

Identity

Accession:: YP_009336788 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

60.7 mean pLDDT

Taxonomy

Hubei_toti-like_virus_9

TaxID: 1923320

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 845-983

PDB

D2 medium residues 141-216_268-292

PDB

D3 medium residues 329-453_497-560

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009336713__Beihai_toti-like_virus_4__1922734__D167-187_213-323_360-427

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	30.0	3.70e-07	66.7%	25.8%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2r7rA05	1.10.357.80	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 ›	0.70	59.0	6.12e-01	96.8%	94.9%
4n06A01	3.100.10.20	Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain	0.52	21.0	2.88e-01	78.8%	74.4%
3n4eA01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.51	28.0	3.55e-01	77.2%	92.3%
2d2mD00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.51	31.0	3.44e-01	94.2%	76.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4875416	304.48.1.13 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flavi_NS5	0.73	69.0	5.34e-01	100.0%	57.1%
5366	304.48.1.15 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3	0.73	69.0	5.29e-01	100.0%	58.5%
4108146	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.68	56.0	4.51e-01	86.2%	60.0%
3792091	304.48.1.25 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RRM_4	0.66	57.0	4.68e-01	93.1%	59.7%
3615272	304.48.1.25 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RRM_4	0.66	58.0	4.56e-01	94.2%	60.0%
4516798	304.48.1.0 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like	0.66	57.0	4.21e-01	91.0%	44.6%
4071235	304.48.1.0 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like	0.66	57.0	4.09e-01	91.0%	40.2%
3598902	304.48.1.0 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like	0.65	57.0	4.48e-01	93.1%	60.3%
3923013	304.48.1.1 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1	0.64	59.0	4.80e-01	98.4%	64.3%
3721071	109.3.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2	0.57	25.0	2.69e-01	89.4%	43.5%

D4 medium residues 454-496_561-648

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009342440__Wuhan_insect_virus_18__1923722__D388-416_481-565_595-607

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	31.2	1.60e-07	83.2%	17.0%

D5 medium residues 652-750

PDB

D6 medium residues 760-823

PDB