←Back to structures

hypothetical_protein

Euk-Vir

Beihai_weivirus-like_virus_11

hypothetical_protein__YP_009337205__Beihai_weivirus-like_virus_11__1922740

Identity

Accession:
YP_009337205 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

71.9 mean pLDDT

Taxonomy

Beihai_weivirus-like_virus_11

TaxID: 1922740

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 52-157_184-205_229-263
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009336877__Beihai_sobemo-like_virus_4__1922701__D84-155_173-212_234-269
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 24.0 3.22e-01 76.1% 73.8%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 24.0 3.54e-01 76.1% 100.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.57 22.0 3.11e-01 76.1% 72.0%
3851361 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.52 28.0 3.42e-01 79.8% 80.0%
3411942 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.51 29.0 3.21e-01 81.6% 68.5%
D2 medium residues 158-183_206-228_264-310
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 51.0 4.27e-01 72.9% 81.3%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 54.0 4.08e-01 78.1% 53.5%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 53.0 3.70e-01 76.0% 38.5%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 53.0 4.20e-01 76.0% 62.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 51.0 3.83e-01 76.0% 51.7%
2w9xB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 44.0 4.37e-01 70.8% 64.0%
2g19A00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.67 48.0 3.67e-01 74.0% 50.9%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 48.0 3.59e-01 76.0% 49.4%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 46.0 4.17e-01 72.9% 65.2%
1sppB00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.66 45.0 4.32e-01 70.8% 65.2%
1sfpA00 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.65 45.0 4.34e-01 71.9% 67.6%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 3.64e-01 70.8% 93.1%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 46.0 3.74e-01 75.0% 66.8%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 3.90e-01 70.8% 65.7%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 44.0 3.93e-01 71.9% 61.3%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 47.0 3.56e-01 81.2% 58.5%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.62 44.0 3.94e-01 74.0% 72.9%
3w57A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.62 43.0 4.12e-01 70.8% 99.1%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.62 43.0 3.46e-01 71.9% 49.2%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 45.0 3.70e-01 78.1% 60.7%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.61 43.0 3.98e-01 71.9% 80.0%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.60 42.0 3.71e-01 71.9% 60.4%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 41.0 3.70e-01 70.8% 97.7%
5zm4B00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.59 48.0 3.45e-01 89.6% 41.5%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 40.0 3.55e-01 71.9% 99.3%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.58 43.0 3.81e-01 80.2% 67.1%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 45.0 4.25e-01 91.7% 69.0%
4kq7A02 2.60.120.1390 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 0.58 42.0 3.25e-01 76.0% 54.5%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 39.0 3.54e-01 71.9% 61.2%
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 41.0 3.52e-01 77.1% 87.7%
2cjsA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 47.0 4.06e-01 94.8% 94.1%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 42.0 4.16e-01 100.0% 79.2%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.65e-01 70.8% 86.7%
1el6A03 3.90.1160.10 Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain 0.53 37.0 3.60e-01 72.9% 98.2%
3m1hD00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 3.84e-01 100.0% 100.0%
1yq5A00 2.60.120.670 Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. 0.52 43.0 3.78e-01 91.7% 97.2%
5v6fA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.51 30.0 2.70e-01 89.6% 39.4%
4ofyD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 34.0 3.42e-01 70.8% 90.3%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 2.85e-01 70.8% 93.6%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038285 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.70 48.0 3.89e-01 70.8% 41.7%
4242187 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.69 50.0 4.69e-01 75.0% 72.2%
3406853 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.69 50.0 4.65e-01 76.0% 64.2%
3798429 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.68 47.0 4.81e-01 72.9% 78.9%
4019005 10.12.1.30 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 3-HAO 0.68 44.0 4.45e-01 71.9% 66.3%
3764565 10.32.1.293 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › AGRB_N 0.67 47.0 4.12e-01 72.9% 64.1%
2539045 10.2.1.12 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat 0.67 48.0 4.23e-01 76.0% 67.1%
3597729 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.67 47.0 4.21e-01 72.9% 98.5%
3912745 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.67 46.0 4.33e-01 70.8% 63.5%
3614575 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 46.0 4.02e-01 71.9% 64.8%
4929726 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 45.0 4.42e-01 70.8% 74.3%
3938807 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.66 50.0 4.78e-01 91.7% 70.0%
3710159 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 44.0 4.29e-01 70.8% 73.6%
1893015 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.64 44.0 3.64e-01 70.8% 93.1%
3276775 10.32.1.262 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Golvesin_C 0.64 44.0 3.96e-01 70.8% 61.5%
3655985 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.64 42.0 3.89e-01 70.8% 52.0%
4439736 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.63 43.0 3.57e-01 70.8% 38.9%
3363456 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.63 41.0 3.75e-01 71.9% 50.4%
3445985 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 49.0 3.51e-01 85.4% 30.3%
4278603 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.63 45.0 3.66e-01 100.0% 40.0%
4325812 11.1.5.85 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C 0.62 49.0 3.68e-01 85.4% 44.1%
3304949 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.62 42.0 3.49e-01 70.8% 76.0%
3752559 10.32.1.28 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.62 43.0 3.42e-01 72.9% 47.3%
4276336 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.62 44.0 3.92e-01 91.7% 50.3%
3516159 109.4.1.88 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MUN 0.60 42.0 2.54e-01 72.9% 17.4%
3258810 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 41.0 3.65e-01 70.8% 85.5%
3270665 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.59 40.0 3.75e-01 70.8% 66.4%
3258529 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 46.0 4.56e-01 91.7% 81.0%
3219055 10.4.1.32 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd 0.58 44.0 4.09e-01 100.0% 62.4%
3267730 11.2.1.50 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 0.58 46.0 4.09e-01 85.4% 100.0%
3542011 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.58 40.0 3.79e-01 72.9% 80.0%
3638666 10.32.1.28 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.57 47.0 3.93e-01 90.6% 62.4%
3415358 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 46.0 3.85e-01 91.7% 55.6%
3448024 11.1.1.558 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6598 0.56 47.0 4.22e-01 91.7% 91.0%
3392335 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.55 44.0 3.80e-01 86.5% 87.3%
3807224 11.1.1.378 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 0.55 39.0 3.35e-01 74.0% 81.9%
3688403 10.32.1.40 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD2 0.55 46.0 3.97e-01 97.9% 56.9%
5039888 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.55 43.0 4.03e-01 91.7% 67.2%
4027566 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 3.30e-01 71.9% 80.0%
3938488 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.54 40.0 3.32e-01 82.3% 52.8%
3883934 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.54 44.0 3.66e-01 91.7% 50.6%
3909622 10.21.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.53 38.0 3.40e-01 75.0% 70.7%
3243972 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.53 44.0 4.08e-01 90.6% 92.8%
3929546 11.1.1.378 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 0.53 37.0 3.25e-01 72.9% 83.9%
1568132 10.32.1.52 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C 0.51 44.0 3.96e-01 100.0% 67.2%