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hypothetical_protein

Euk-Vir

Hubei_virga-like_virus_15

hypothetical_protein__YP_009337695__Hubei_virga-like_virus_15__1923330

Identity

Accession:
YP_009337695 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

74.2 mean pLDDT

Taxonomy

Hubei_virga-like_virus_15

TaxID: 1923330

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-191
PDB
Domain cluster: rep: hypothetical_protein__YP_009333288__Hubei_virga-like_virus_18__1923333__D68-225
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16504.11 best SP24 118.7 2.90e-34 97.4% 97.3%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.69 32.0 3.67e-01 87.2% 58.8%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.64 32.0 4.18e-01 84.6% 84.9%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 30.0 2.62e-01 86.5% 29.2%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.63 30.0 3.12e-01 86.5% 46.4%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 33.0 3.93e-01 91.7% 76.6%
3fmsA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.56 41.0 4.31e-01 98.7% 83.7%
1oshA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.56 41.0 3.72e-01 100.0% 55.1%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 34.0 4.08e-01 80.8% 89.8%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 33.0 3.41e-01 94.9% 63.8%
3ljbA00 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.54 44.0 3.88e-01 85.3% 85.4%
5d91A02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.53 45.0 4.15e-01 96.2% 71.7%
1p8dB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 40.0 3.50e-01 100.0% 51.5%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.53 28.0 2.60e-01 86.5% 37.3%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.52 32.0 2.93e-01 87.8% 42.7%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 33.0 3.75e-01 89.7% 82.0%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.52 32.0 3.28e-01 86.5% 60.3%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 30.0 3.06e-01 87.2% 54.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 28.0 3.37e-01 86.5% 80.4%
2wb7A03 1.20.120.870 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain 0.50 41.0 4.38e-01 86.5% 100.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3235302 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 31.0 2.58e-01 86.5% 25.1%
3962991 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.65 31.0 2.90e-01 85.9% 36.4%
5039743 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.61 29.0 2.93e-01 86.5% 42.4%
4987543 1075.5.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.60 37.0 3.50e-01 100.0% 48.9%
433161 628.1.1.1 ↗ alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.59 42.0 4.43e-01 100.0% 81.3%
3955485 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.58 35.0 2.88e-01 89.1% 31.0%
3435812 3711.1.1.0 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein 0.54 39.0 4.33e-01 100.0% 92.8%
3770253 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 35.0 3.30e-01 85.3% 54.6%
4955963 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 30.0 2.74e-01 84.6% 40.0%
3239667 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 41.0 2.66e-01 85.3% 98.0%
4121806 4177.1.1.66 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › ATG17_like 0.51 30.0 2.41e-01 90.4% 26.4%