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hypothetical_protein

Euk-Vir

Hubei_permutotetra-like_virus_5

hypothetical_protein__YP_009337743__Hubei_permutotetra-like_virus_5__1923079

Identity

Accession:
YP_009337743 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

76.3 mean pLDDT

Taxonomy

Hubei_permutotetra-like_virus_5

TaxID: 1923079

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-219
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
D2 high residues 230-351
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 35.0 3.98e-01 100.0% 75.6%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 35.0 3.39e-01 100.0% 56.2%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 36.0 3.45e-01 100.0% 58.6%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 30.0 3.47e-01 91.0% 77.9%
2pqqA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 35.0 3.38e-01 100.0% 57.1%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 27.0 3.22e-01 76.2% 72.5%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 34.0 3.49e-01 100.0% 68.9%
2zcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 35.0 3.66e-01 100.0% 77.7%
5h7jA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 33.0 3.54e-01 86.9% 75.9%
5e44A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 3.22e-01 100.0% 56.8%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1842585 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 79.0 7.17e-01 100.0% 94.3%
3512937 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.80 74.0 7.01e-01 100.0% 95.1%
3505220 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 74.0 6.98e-01 100.0% 97.2%
4273414 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 36.0 4.42e-01 100.0% 97.1%
3292420 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 36.0 4.06e-01 100.0% 76.7%
3973553 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 36.0 4.37e-01 100.0% 98.6%
4281020 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 35.0 3.89e-01 100.0% 72.6%
1696280 1.2.1.0 ↗ beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain 0.60 53.0 4.77e-01 100.0% 83.4%
4047241 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 34.0 3.82e-01 100.0% 71.6%
4204303 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 35.0 3.90e-01 100.0% 76.7%
4038642 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 34.0 4.16e-01 100.0% 97.1%
4526316 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 35.0 3.84e-01 93.4% 74.7%
4512995 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 34.0 4.09e-01 92.6% 100.0%
4128405 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 33.0 4.06e-01 92.6% 100.0%
3561733 5.1.3.253 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CATSPERB_head 0.56 39.0 4.42e-01 100.0% 98.9%
4316004 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 35.0 4.00e-01 96.7% 88.2%
3850571 1.1.7.114 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CATSPERB_head 0.56 39.0 4.44e-01 100.0% 100.0%
3421072 1.1.1.30 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 0.53 33.0 3.44e-01 73.0% 65.2%
3436417 1.1.1.17 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 0.53 33.0 3.26e-01 72.1% 57.7%
4087314 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 32.0 3.70e-01 91.0% 87.5%
3931768 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.53 32.0 3.22e-01 71.3% 57.6%
2997073 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.52 35.0 3.33e-01 100.0% 58.5%
4399923 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.51 35.0 3.68e-01 99.2% 78.2%
3502254 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.51 31.0 3.48e-01 71.3% 77.9%