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hypothetical_protein

Euk-Vir

Wenzhou_tombus-like_virus_15

hypothetical_protein__YP_009342288__Wenzhou_tombus-like_virus_15__1923668

Identity

Accession:
YP_009342288 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

54.9 mean pLDDT

Taxonomy

TaxID: 1923668

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67
PDB
D2 medium residues 496-532_817-954
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uz0A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 21.0 2.81e-01 96.0% 66.7%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.51 28.0 3.14e-01 88.6% 65.5%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 22.0 3.18e-01 91.4% 87.3%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 28.0 3.65e-01 75.4% 100.0%
D3 medium residues 533-568_683-718_739-750
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dfzA02 1.10.8.610 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › SirC, precorrin-2 dehydrogenase, C-terminal helical domain-like 0.56 36.0 3.81e-01 85.7% 74.3%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.55 42.0 3.98e-01 82.1% 83.8%
2a2fX02 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.53 39.0 3.52e-01 81.0% 82.2%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 42.0 2.92e-01 92.9% 86.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3578491 7023.1.1.0 alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein 0.59 33.0 3.44e-01 81.0% 57.5%
5012655 7014.1.1.2 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE 0.56 40.0 3.45e-01 77.4% 61.5%
4028455 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.50 38.0 3.38e-01 83.3% 82.3%
D4 medium residues 569-648_719-738
PDB
D5 medium residues 649-682_751-816
PDB