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hypothetical_protein

Euk-Vir

Wuhan_heteroptera_virus_1

hypothetical_protein__YP_009342333__Wuhan_heteroptera_virus_1__1923701

Identity

Accession:
YP_009342333 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

70.0 mean pLDDT

Taxonomy

TaxID: 1923701

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-100
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.88 65.0 6.09e-01 83.6% 64.4%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.88 65.0 7.31e-01 83.6% 97.9%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 63.0 5.82e-01 77.0% 67.6%
7vevA01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.82 61.0 3.91e-01 77.0% 89.9%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 65.0 6.54e-01 90.2% 82.3%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.80 61.0 6.19e-01 88.5% 82.0%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.79 61.0 6.30e-01 88.5% 86.2%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.78 55.0 5.97e-01 85.2% 90.0%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 61.0 5.98e-01 88.5% 78.1%
4w8kA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.78 54.0 3.68e-01 73.8% 22.2%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.75 65.0 6.04e-01 98.4% 77.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 60.0 5.50e-01 86.9% 68.4%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 59.0 5.37e-01 88.5% 66.7%
1nafA02 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 65.0 5.73e-01 98.4% 78.8%
6he1B01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.71 52.0 5.14e-01 77.0% 73.4%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 51.0 4.76e-01 82.0% 63.2%
1oksA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.69 44.0 4.67e-01 70.5% 73.6%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.68 49.0 4.90e-01 78.7% 80.0%
1z72A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.67 60.0 4.09e-01 100.0% 31.5%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.67 58.0 5.49e-01 98.4% 83.8%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 58.0 4.66e-01 98.4% 69.7%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.66 51.0 5.18e-01 85.2% 96.7%
3rm5B02 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.65 58.0 3.91e-01 100.0% 27.7%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.65 48.0 4.37e-01 82.0% 69.3%
2kkmA01 1.20.1440.170 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like 0.65 57.0 4.52e-01 100.0% 64.0%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.64 55.0 4.16e-01 96.7% 64.7%
5c8aA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.62 49.0 4.61e-01 96.7% 70.5%
6lumD01 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.62 48.0 3.87e-01 86.9% 66.4%
1f05A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 52.0 3.36e-01 100.0% 84.8%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 39.0 3.78e-01 70.5% 64.7%
1v4aA01 1.10.4050.10 Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE 0.57 50.0 4.17e-01 100.0% 76.1%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3692552 5071.3.1.0 alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 0.89 60.0 5.93e-01 73.8% 66.2%
4193561 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.89 60.0 6.93e-01 85.2% 95.6%
4349607 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.88 67.0 5.31e-01 85.2% 43.6%
3491738 632.8.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.88 66.0 5.47e-01 83.6% 48.5%
3990182 3922.1.1.226 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 0.87 67.0 5.24e-01 83.6% 42.6%
5008556 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.86 64.0 5.58e-01 86.9% 55.3%
5053090 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 63.0 6.40e-01 82.0% 80.0%
3436926 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 65.0 6.01e-01 83.6% 66.2%
3218199 192.4.1.0 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.83 65.0 5.59e-01 82.0% 56.7%
2456957 192.13.1.1 alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.83 62.0 6.48e-01 85.2% 85.7%
3962991 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 62.0 4.27e-01 80.3% 68.2%
4112414 2004.1.1.301 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.78 60.0 3.67e-01 82.0% 17.0%
4485576 1.1.17.4 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.76 69.0 4.36e-01 98.4% 39.3%
5044958 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.76 53.0 4.84e-01 75.4% 56.2%
3410128 5041.1.1.0 extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.75 58.0 5.71e-01 83.6% 86.2%
3253283 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.73 66.0 5.59e-01 96.7% 80.0%
5060252 632.23.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I 0.73 52.0 4.68e-01 78.7% 54.1%
3715120 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.72 50.0 5.11e-01 85.2% 75.0%
4294845 397.7.1.1 few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › Vicilin_N 0.72 49.0 5.02e-01 80.3% 73.3%
5060248 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.70 52.0 5.03e-01 80.3% 70.0%
3280999 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.69 64.0 4.62e-01 100.0% 76.8%
3956688 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.69 62.0 4.19e-01 98.4% 84.5%
4533982 375.1.9.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase 0.66 62.0 4.71e-01 100.0% 66.2%
2669324 5000.3.1.1 alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2 0.63 44.0 4.21e-01 95.1% 62.2%
2925012 138.1.1.0 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.59 49.0 3.89e-01 100.0% 44.4%
4017235 190.1.1.0 alpha arrays › HMG-box-like › HMG-box › HMG-box 0.57 39.0 3.23e-01 73.8% 62.5%
D2 medium residues 101-177
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16504.11 best SP24 61.2 1.60e-16 100.0% 51.0%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xz3A01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.73 54.0 4.74e-01 79.2% 73.5%
4nv0A02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.67 50.0 4.96e-01 88.3% 75.6%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 53.0 4.87e-01 100.0% 89.8%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.63 54.0 4.13e-01 100.0% 61.1%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 50.0 4.10e-01 85.7% 53.0%
4b6iA00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 51.0 4.65e-01 89.6% 79.0%
5cy5B00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.61 43.0 3.63e-01 77.9% 91.3%
1y8aA02 1.10.3870.10 Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily 0.61 52.0 4.51e-01 93.5% 87.1%
2g8yA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.59 40.0 3.63e-01 76.6% 48.7%
1to9A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.58 48.0 3.57e-01 94.8% 77.3%
2rd3D00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.57 47.0 3.51e-01 93.5% 80.3%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.57 40.0 3.61e-01 76.6% 60.7%
3djbA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.56 45.0 4.29e-01 92.2% 97.9%
1e9rA02 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.56 39.0 3.57e-01 75.3% 87.6%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 45.0 4.20e-01 89.6% 77.6%
4axzA00 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.55 48.0 3.54e-01 100.0% 58.3%
2o7gA00 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.55 39.0 3.81e-01 76.6% 89.8%
3fvvA02 1.20.1440.100 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function 0.54 38.0 3.85e-01 72.7% 74.7%
1z72A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.54 46.0 3.43e-01 100.0% 76.4%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3249525 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.73 53.0 4.29e-01 76.6% 66.2%
3301471 5067.1.1.17 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › AtTam38 0.72 54.0 4.77e-01 79.2% 95.5%
3229885 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.72 52.0 4.76e-01 75.3% 77.6%
3308892 3273.1.1.9 alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › AtTam38 0.71 53.0 4.41e-01 79.2% 77.8%
1145722 601.4.1.6 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TorS_sensor_domain 0.71 52.0 4.19e-01 77.9% 75.7%
4027497 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.70 52.0 5.78e-01 77.9% 100.0%
3740102 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.69 60.0 5.13e-01 98.7% 95.2%
3258290 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.68 48.0 4.91e-01 75.3% 93.3%
3955485 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.67 48.0 3.24e-01 75.3% 35.2%
3331738 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.67 49.0 4.46e-01 79.2% 81.0%
3597591 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.66 48.0 5.03e-01 77.9% 97.1%
4022703 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.66 56.0 5.28e-01 97.4% 98.9%
4945751 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 46.0 4.10e-01 74.0% 97.3%
3264889 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.65 46.0 4.52e-01 75.3% 80.0%
3272866 611.8.1.0 alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 0.63 56.0 4.34e-01 98.7% 89.4%
3428249 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 51.0 5.31e-01 100.0% 100.0%
3437969 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 45.0 4.47e-01 77.9% 96.4%
3252871 5000.4.1.0 alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain 0.61 56.0 3.93e-01 100.0% 80.0%
3932947 3291.1.1.1 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.61 49.0 4.07e-01 94.8% 81.3%
1721534 592.1.1.2 alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.59 38.0 3.37e-01 92.2% 42.9%
4975796 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.59 43.0 4.06e-01 79.2% 76.8%
3805676 1128.1.1.13 alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 0.57 44.0 4.29e-01 87.0% 81.1%
3783607 171.1.1.0 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like 0.56 47.0 3.89e-01 100.0% 65.2%
3705705 103.4.1.2 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M 0.55 46.0 4.12e-01 96.1% 72.2%
4995419 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.55 38.0 3.75e-01 74.0% 78.8%
3507013 4266.1.1.5 alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › TraX 0.54 49.0 3.55e-01 98.7% 73.7%
3971 150.1.2.5 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › TENA_THI-4 0.54 46.0 3.43e-01 100.0% 76.4%
3175685 7060.1.1.0 alpha arrays › ELMO domain › ELMO domain › ELMO domain 0.52 45.0 3.52e-01 97.4% 93.7%