hypothetical_protein

Euk-Vir

Ranid_herpesvirus_3

hypothetical_protein__YP_009362333__Ranid_herpesvirus_3__1987509

Identity

70.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Alloherpesviridae› Batravirus› Ranid_herpesvirus_3

TaxID: 1987509

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-154

PDB

Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2fhdA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.64	29.0	4.15e-01	70.8%	93.5%
3k8uA01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.58	35.0	3.62e-01	93.4%	62.6%
3lhnA00	2.40.128.640	Mainly Beta › Beta Barrel › Lipocalin ›	0.57	36.0	4.02e-01	86.1%	81.3%
3gd0A02	3.30.920.50	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain	0.53	37.0	4.05e-01	81.0%	86.6%
4r7rA00	3.30.1490.410	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883	0.52	34.0	3.58e-01	84.7%	73.8%
2lezA00	3.30.2450.10	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2	0.51	30.0	3.19e-01	87.6%	62.5%
5h1kA02	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.50	45.0	3.37e-01	99.3%	94.2%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3580534	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.53	43.0	3.28e-01	84.7%	94.3%
142988	243.6.1.4 ↗	a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA	0.53	35.0	4.12e-01	70.8%	98.9%
3413660	5.1.5.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40	0.53	41.0	2.89e-01	82.5%	47.3%
3464133	5.1.4.310 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PQQ_2	0.53	45.0	3.30e-01	94.9%	85.1%
None	—		0.52	41.0	3.02e-01	81.8%	72.0%
3791091	5.1.4.73 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RAB3GAP2_N	0.52	45.0	3.15e-01	94.2%	98.0%
3601334	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.52	37.0	3.52e-01	98.5%	60.5%
3436651	5.1.3.118 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3	0.52	43.0	3.24e-01	91.2%	100.0%
3397097	5.1.5.68 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N	0.52	44.0	3.18e-01	92.7%	97.5%
3622714	5.1.5.113 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR19_1st	0.51	40.0	2.98e-01	81.8%	72.0%

D2 high residues 169-286

PDB

Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02393.22 best	US22	45.5	1.00e-11	87.3%	86.3%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2fhdA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.59	30.0	4.05e-01	77.1%	93.5%
1d4tA00	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.55	39.0	4.11e-01	95.8%	82.7%
3r90A00	3.10.400.20	Alpha Beta › Roll › Sulfate adenylyltransferase ›	0.53	37.0	3.26e-01	73.7%	94.1%
2ymsC00	2.40.10.480	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.53	33.0	4.00e-01	80.5%	100.0%
3sokB00	3.30.700.10	Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin	0.52	41.0	3.93e-01	87.3%	71.1%
1inlC02	2.30.140.10	Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain	0.51	29.0	3.62e-01	89.8%	100.0%
3v9fA02	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.51	46.0	3.42e-01	100.0%	92.4%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3413660	5.1.5.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40	0.57	45.0	3.02e-01	83.9%	46.6%
3436651	5.1.3.118 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3	0.56	51.0	3.64e-01	100.0%	88.2%
3579728	4.1.1.92 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_9	0.56	30.0	3.73e-01	83.1%	87.1%
3252578	5.1.4.34 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88	0.56	50.0	3.27e-01	100.0%	83.1%
3305583	5.1.5.11 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2	0.55	43.0	3.02e-01	83.9%	87.5%
3609150	5.1.3.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed	0.52	42.0	3.01e-01	85.6%	36.1%
3400787	5.1.4.408 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C	0.52	47.0	3.07e-01	100.0%	87.1%
4025576	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.51	45.0	3.55e-01	97.5%	87.8%