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hypothetical_protein

Euk-Vir

Ranid_herpesvirus_3

hypothetical_protein__YP_009362338__Ranid_herpesvirus_3__1987509

Identity

Accession:: YP_009362338 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

72.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Alloherpesviridae› Batravirus› Ranid_herpesvirus_3

TaxID: 1987509

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-110

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rguB00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.63	30.0	3.32e-01	71.3%	55.2%
2dn0A00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.55	30.0	3.49e-01	75.0%	73.7%
2qytA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.55	30.0	3.08e-01	96.3%	52.5%
2vvyA01	1.10.437.20	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus	0.54	42.0	4.01e-01	86.1%	95.5%
2awiA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.53	29.0	3.45e-01	85.2%	82.1%
1wcrA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.52	29.0	3.03e-01	74.1%	57.3%
3b77B02	1.10.287.210	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	29.0	3.24e-01	72.2%	67.8%
2y1hB00	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.52	42.0	3.24e-01	89.8%	99.2%
8dtqA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.51	36.0	3.97e-01	96.3%	96.3%
1zq3P00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.51	27.0	3.27e-01	73.1%	80.9%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3403179	604.7.1.1 ↗	alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA	0.72	30.0	3.09e-01	70.4%	40.0%
3271988	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.68	34.0	3.98e-01	85.2%	68.5%
3811492	103.4.1.2 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M	0.62	40.0	3.76e-01	87.0%	54.6%
5012032	1075.1.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain	0.60	47.0	3.84e-01	84.3%	62.9%
4950340	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.59	41.0	3.55e-01	72.2%	82.3%
5010701	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.57	41.0	3.40e-01	75.0%	72.0%
4955370	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.56	33.0	3.81e-01	86.1%	78.8%
3974777	5050.1.1.22 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like	0.56	41.0	3.43e-01	76.9%	75.3%
3623545	5050.1.1.1 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr	0.56	39.0	3.12e-01	73.1%	59.1%
3934886	109.4.1.1329 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234	0.55	40.0	2.39e-01	75.9%	22.1%
3733546	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.55	40.0	3.12e-01	75.9%	60.0%
4584259	532.2.1.1 ↗	alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ	0.54	38.0	3.92e-01	75.0%	88.6%
3945367	5050.1.1.1 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr	0.52	43.0	3.43e-01	91.7%	100.0%
5064651	3236.1.1.1 ↗	alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger	0.51	44.0	3.09e-01	99.1%	97.5%
4942849	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.51	37.0	3.18e-01	77.8%	72.1%