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hypothetical_protein
Euk-VirRanid_herpesvirus_3
hypothetical_protein__YP_009362339__Ranid_herpesvirus_3__1987509
Identity
- Accession:
- YP_009362339 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
76.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Batravirus›
Ranid_herpesvirus_3
TaxID: 1987509
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-100
Domain cluster:
rep: membrane_glycoprotein_UL144__NP_612758__Panine_betaherpesvirus_2__188763__D28-98
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00020.25 best | TNFR_c6 | 36.9 | 5.30e-09 | 51.9% | 100.0% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.88 | 66.0 | 6.40e-01 | 77.2% | 80.0% |
| 5wjfA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.88 | 65.0 | 6.76e-01 | 88.6% | 82.4% |
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.85 | 65.0 | 6.39e-01 | 79.7% | 81.9% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.84 | 62.0 | 6.30e-01 | 77.2% | 82.3% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.84 | 64.0 | 6.23e-01 | 79.7% | 80.0% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.82 | 61.0 | 6.07e-01 | 78.5% | 80.7% |
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.82 | 64.0 | 6.30e-01 | 82.3% | 84.3% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.81 | 61.0 | 6.13e-01 | 79.7% | 82.7% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.80 | 60.0 | 6.02e-01 | 78.5% | 83.7% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.79 | 58.0 | 5.87e-01 | 77.2% | 79.7% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.78 | 64.0 | 6.47e-01 | 86.1% | 89.6% |
| 2x10A03 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.61 | 48.0 | 5.21e-01 | 91.1% | 100.0% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3893267 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 68.0 | 7.79e-01 | 77.2% | 100.0% |
| 3916366 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 61.0 | 7.27e-01 | 75.9% | 100.0% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 67.0 | 6.57e-01 | 78.5% | 77.6% |
| 3843570 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 65.0 | 7.43e-01 | 77.2% | 100.0% |
| 3568618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 67.0 | 7.14e-01 | 78.5% | 88.6% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 64.0 | 6.44e-01 | 75.9% | 80.0% |
| 3869177 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 65.0 | 6.72e-01 | 77.2% | 88.0% |
| 3774474 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 62.0 | 6.42e-01 | 73.4% | 84.0% |
| 3883090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 66.0 | 6.59e-01 | 78.5% | 83.7% |
| 3886488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 66.0 | 6.48e-01 | 79.7% | 82.4% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 64.0 | 6.44e-01 | 77.2% | 83.7% |
| 3756712 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 74.0 | 6.59e-01 | 89.9% | 75.2% |
| 3526975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 77.0 | 5.77e-01 | 94.9% | 53.1% |
| 3880887 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 61.0 | 6.13e-01 | 73.4% | 80.0% |
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 64.0 | 6.39e-01 | 77.2% | 82.5% |
| 3516979 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 63.0 | 6.35e-01 | 77.2% | 82.5% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 64.0 | 6.27e-01 | 78.5% | 78.8% |
| 3887726 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 63.0 | 6.33e-01 | 77.2% | 80.0% |
| 3891819 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 66.0 | 6.62e-01 | 81.0% | 100.0% |
| 3555618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 60.0 | 6.16e-01 | 73.4% | 82.7% |
| 3882488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 62.0 | 6.70e-01 | 77.2% | 100.0% |
| 3763206 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 73.0 | 7.32e-01 | 92.4% | 92.5% |
| 3910090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 71.0 | 6.05e-01 | 89.9% | 59.2% |
| 3893268 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.83 | 55.0 | 6.52e-01 | 73.4% | 100.0% |
| 1184747 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 61.0 | 6.01e-01 | 77.2% | 80.5% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.81 | 58.0 | 5.85e-01 | 74.7% | 80.0% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 69.0 | 6.41e-01 | 89.9% | 81.1% |
| 3894281 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 66.0 | 6.46e-01 | 86.1% | 82.4% |
| 4221424 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 58.0 | 5.82e-01 | 74.7% | 80.0% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 61.0 | 6.05e-01 | 78.5% | 82.7% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 60.0 | 5.98e-01 | 77.2% | 82.5% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 66.0 | 5.27e-01 | 86.1% | 54.5% |
| 3768685 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 69.0 | 6.51e-01 | 92.4% | 85.3% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.80 | 56.0 | 5.78e-01 | 72.2% | 77.3% |
| 3541402 | 389.1.3.26 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › PF27736 | 0.80 | 68.0 | 6.65e-01 | 89.9% | 100.0% |
| 3900125 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.80 | 60.0 | 6.03e-01 | 78.5% | 78.8% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 60.0 | 5.97e-01 | 79.7% | 82.9% |
| 3758936 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.79 | 58.0 | 6.21e-01 | 77.2% | 90.0% |
| 3913465 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 52.0 | 5.77e-01 | 84.8% | 83.1% |
| 3537445 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.78 | 51.0 | 6.13e-01 | 75.9% | 96.4% |
| 3524839 | 389.1.3.24 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6, PF27736 | 0.78 | 69.0 | 6.00e-01 | 94.9% | 85.2% |
| 3927938 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.77 | 50.0 | 5.92e-01 | 72.2% | 94.5% |
| 3628941 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.77 | 47.0 | 5.86e-01 | 70.9% | 98.0% |
| 3844666 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 64.0 | 6.83e-01 | 93.7% | 100.0% |
| 3885918 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.76 | 66.0 | 6.78e-01 | 94.9% | 96.0% |
| 3504249 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.76 | 51.0 | 5.76e-01 | 74.7% | 87.3% |
| 3623424 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.76 | 49.0 | 5.80e-01 | 73.4% | 94.5% |
| 3585161 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.76 | 50.0 | 5.20e-01 | 75.9% | 72.0% |
| 3580243 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.76 | 50.0 | 5.29e-01 | 74.7% | 75.7% |
| 3579538 | 389.1.1.152 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, EGF_3 | 0.74 | 48.0 | 3.83e-01 | 74.7% | 35.3% |
| 3537811 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 54.0 | 5.13e-01 | 88.6% | 66.7% |
| 3880888 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 60.0 | 5.73e-01 | 100.0% | 76.7% |
| 3517313 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.72 | 47.0 | 5.04e-01 | 79.7% | 75.7% |
| 3551829 | 3774.1.1.12 ↗ | extended segments › Fibroblast growth factor receptor 3 transmembrane domain › Fibroblast growth factor receptor 3 transmembrane domain › Fibroblast growth factor receptor 3 transmembrane domain › Ephrin_rec_like | 0.70 | 47.0 | 5.10e-01 | 73.4% | 83.1% |
| 3585068 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.70 | 49.0 | 5.56e-01 | 77.2% | 95.0% |
| 3482384 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.69 | 50.0 | 5.34e-01 | 79.7% | 85.7% |
| 3922923 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.69 | 50.0 | 5.53e-01 | 75.9% | 92.3% |
| 3226479 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.67 | 49.0 | 5.20e-01 | 75.9% | 87.1% |
| 1572587 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 53.0 | 5.11e-01 | 84.8% | 83.1% |
| 3549809 | 389.1.1.105 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, Ephrin_CRD | 0.67 | 52.0 | 4.29e-01 | 82.3% | 69.6% |
| 3991090 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.66 | 49.0 | 5.28e-01 | 77.2% | 89.7% |
| 1884975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.64 | 50.0 | 5.07e-01 | 84.8% | 83.1% |
| 3535598 | 389.1.3.3 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › Ephrin_rec_like | 0.60 | 51.0 | 5.04e-01 | 93.7% | 88.2% |
| 3545523 | 389.1.1.8 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like | 0.59 | 48.0 | 5.13e-01 | 92.4% | 100.0% |
| 3797656 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.54 | 45.0 | 3.91e-01 | 97.5% | 81.5% |