hypothetical_protein

Euk-Vir

Ranid_herpesvirus_3

hypothetical_protein__YP_009362430__Ranid_herpesvirus_3__1987509

Identity

39.4 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Alloherpesviridae› Batravirus› Ranid_herpesvirus_3

TaxID: 1987509

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-105

PDB

D2 high residues 126-198

PDB

D3 high residues 585-617_950-1041

PDB

Domain cluster: rep: ORF46-like_protein__YP_009552957__Bufonid_herpesvirus_1__2282206__D591-614_929-1016

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17072.11 best	Spike_torovirin	123.4	1.30e-35	75.2%	7.2%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2b9bA01	2.40.490.10	Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain	0.61	47.0	4.91e-01	85.6%	90.4%
1ztmA01	2.40.490.10	Mainly Beta › Beta Barrel › Head and neck region of the ectodomain of NDV fusion glycoprotein › Newcastle disease virus like domain	0.59	47.0	4.98e-01	88.0%	99.1%
1i7dA03	2.70.20.10	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3	0.52	32.0	3.10e-01	78.4%	53.2%
3jv1A00	3.10.280.10	Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein	0.52	38.0	3.32e-01	75.2%	59.3%
2n1hA00	2.70.130.10	Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain	0.51	28.0	3.10e-01	91.2%	67.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4873341	11.40.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-like domain in paramyxoviruses fusion protein › Immunoglobulin-like domain in paramyxoviruses fusion protein › Fusion_gly	0.64	52.0	3.90e-01	89.6%	99.4%
1737404	5093.1.1.1 ↗	a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Fusion_gly	0.61	50.0	3.72e-01	89.6%	99.1%
3585032	9.1.1.50 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042	0.53	37.0	3.68e-01	72.0%	93.1%
4986251	216.1.1.0 ↗	a+b two layers › UBC-like › UBC-like › UBC-like	0.51	30.0	3.44e-01	95.2%	78.9%

D4 medium residues 231-381

PDB

D5 medium residues 466-519_539-584

PDB

D6 medium residues 1111-1126_1201-1250

PDB

D7 medium residues 1127-1188

PDB