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hypothetical_protein

Euk-Vir

Torque_teno_midi_virus_10

hypothetical_protein__YP_009505778__Torque_teno_midi_virus_10__2065051

Identity

Accession:
YP_009505778 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

81.2 mean pLDDT

Taxonomy

Shotokuvirae› Commensaviricota› Cardeaviricetes› Sanitavirales› Anelloviridae› Gammatorquevirus› Torque_teno_midi_virus_10

TaxID: 2065051

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 72-107_156-197_231-252_480-490
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02956.21 best TT_ORF1 42.8 4.20e-11 42.3% 8.2%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.01e-01 100.0% 61.9%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.35e-01 99.1% 91.2%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 3.84e-01 100.0% 69.5%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 3.70e-01 100.0% 60.4%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 4.06e-01 94.6% 92.2%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 3.84e-01 100.0% 77.1%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.77e-01 100.0% 65.8%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.74e-01 92.8% 90.6%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.72e-01 100.0% 82.5%
2gysA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.66e-01 89.2% 76.5%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.26e-01 100.0% 44.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3894335 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 4.07e-01 88.3% 77.0%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.55 49.0 3.81e-01 100.0% 81.7%
1211 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.54 48.0 3.70e-01 100.0% 60.4%
3870814 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 34.0 3.70e-01 89.2% 77.9%
3530404 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 35.0 3.38e-01 90.1% 60.8%
D2 medium residues 108-155_198-230_491-509
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02956.21 best TT_ORF1 73.2 2.70e-20 52.0% 9.7%
PF02956.21 TT_ORF1 29.5 4.60e-07 34.0% 6.3%
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 4.90e-01 96.0% 90.2%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 57.0 4.61e-01 96.0% 92.2%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 58.0 4.73e-01 99.0% 88.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 56.0 4.15e-01 97.0% 69.2%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 4.20e-01 98.0% 61.9%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 4.73e-01 97.0% 89.7%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 56.0 4.33e-01 97.0% 78.0%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.61e-01 98.0% 84.8%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 55.0 4.49e-01 100.0% 80.0%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 54.0 4.26e-01 98.0% 77.4%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 54.0 4.64e-01 99.0% 88.3%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.51e-01 97.0% 88.8%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.57e-01 98.0% 88.9%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.60 51.0 4.53e-01 93.0% 77.8%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.32e-01 99.0% 76.5%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 4.28e-01 96.0% 89.1%
1dglA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.57e-01 91.0% 84.4%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 40.0 4.01e-01 94.0% 72.4%
1qg3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.86e-01 93.0% 70.2%
3w5mA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.98e-01 94.0% 72.5%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 4.13e-01 92.0% 78.8%
1m1cA00 3.90.1840.10 Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein 0.53 41.0 2.55e-01 83.0% 93.2%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.80e-01 94.0% 74.3%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 4.10e-01 94.0% 78.9%
2xwxA03 2.60.40.2550 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 34.0 3.52e-01 95.0% 70.4%
4nzdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.68e-01 92.0% 70.6%
2je8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.97e-01 90.0% 81.4%
5b71E00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.51 35.0 3.65e-01 93.0% 77.4%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.84e-01 95.0% 79.2%
7ui8A01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.96e-01 94.0% 83.3%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.96e-01 96.0% 76.9%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 37.0 3.54e-01 94.0% 63.2%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3686686 219.1.1.112 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 0.59 40.0 2.65e-01 70.0% 80.7%
5053398 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 40.0 4.02e-01 92.0% 71.0%
3653766 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 52.0 4.40e-01 98.0% 76.2%
4446429 11.1.1.63 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_alpha 0.56 45.0 4.02e-01 95.0% 60.7%
4023131 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.56 37.0 3.97e-01 90.0% 80.0%
4025708 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 42.0 3.58e-01 81.0% 85.8%
3592053 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 37.0 2.95e-01 70.0% 94.8%
3213270 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.65e-01 91.0% 55.7%
3897855 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.55 46.0 3.86e-01 93.0% 84.5%
3833781 11.1.1.863 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_VIN3 0.55 38.0 3.72e-01 92.0% 65.5%
3615658 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 3.53e-01 98.0% 44.0%
4181813 11.1.1.1064 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27409 0.54 43.0 4.38e-01 96.0% 90.5%
3211221 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.96e-01 91.0% 75.2%
4955277 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.34e-01 93.0% 80.0%
2396500 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.53 39.0 3.94e-01 92.0% 75.5%
3573566 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.62e-01 95.0% 58.5%
3355092 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 31.0 3.00e-01 94.0% 46.7%
5028814 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 4.02e-01 93.0% 80.0%
1590 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.53 39.0 3.90e-01 89.0% 74.3%
4943484 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.93e-01 98.0% 62.0%
3931538 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 40.0 3.97e-01 92.0% 77.1%
3919667 269.1.1.3 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › COLFI 0.53 44.0 3.56e-01 95.0% 67.3%
4987213 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 4.09e-01 92.0% 88.9%
3473069 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 41.0 3.76e-01 94.0% 63.0%
3508657 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.52 38.0 3.07e-01 78.0% 72.4%
3509590 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.52 37.0 3.22e-01 75.0% 80.6%
3910809 11.10.1.10 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › PF28124 0.52 36.0 3.18e-01 74.0% 72.5%
3767529 10.32.1.20 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.52 44.0 3.50e-01 95.0% 70.0%
3514199 11.1.1.187 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EFF-AFF 0.52 35.0 3.46e-01 89.0% 64.5%
3882782 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.51 44.0 4.05e-01 96.0% 83.8%
3560772 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 39.0 3.80e-01 91.0% 72.2%
4000498 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.82e-01 95.0% 75.9%
D3 medium residues 253-279_345-479
PDB
Domain cluster: rep: ORF1__YP_009505738__Torque_teno_mini_virus_11__2065037__D379-509
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02956.21 best TT_ORF1 110.4 1.40e-31 100.0% 26.7%
D4 medium residues 280-344
PDB
Domain cluster: rep: hypothetical_protein__YP_009505774__Torque_teno_midi_virus_9__2065050__D268-336
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 47.0 3.50e-01 76.9% 73.8%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.62 40.0 4.00e-01 78.5% 63.6%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.60 39.0 4.04e-01 80.0% 70.5%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.60 46.0 3.54e-01 86.2% 82.1%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.59 36.0 3.91e-01 86.2% 76.0%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.58 49.0 3.82e-01 100.0% 69.6%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 4.00e-01 92.3% 84.1%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 41.0 3.63e-01 76.9% 100.0%
4jn3A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.57 44.0 3.20e-01 89.2% 69.8%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 46.0 3.50e-01 89.2% 77.4%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.57 43.0 4.10e-01 84.6% 71.1%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.56 40.0 3.15e-01 75.4% 93.6%
4bpuC00 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.56 47.0 3.00e-01 96.9% 77.9%
4zfjD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 45.0 3.25e-01 95.4% 75.3%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 3.87e-01 89.2% 76.0%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 43.0 3.48e-01 84.6% 47.3%
2d5mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 49.0 3.57e-01 100.0% 69.9%
1qxfA00 2.20.25.100 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 0.56 40.0 4.17e-01 76.9% 100.0%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.55e-01 89.2% 79.3%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.62e-01 89.2% 84.8%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.36e-01 89.2% 64.3%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 3.54e-01 90.8% 80.1%
2pnqA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.54 47.0 2.96e-01 100.0% 59.7%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 3.74e-01 89.2% 82.2%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.56e-01 89.2% 80.6%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.06e-01 93.8% 79.7%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.53 44.0 2.90e-01 98.5% 73.5%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.53 37.0 3.36e-01 73.8% 72.3%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 40.0 3.45e-01 81.5% 67.3%
3ujzA03 2.60.20.40 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.53 40.0 3.52e-01 83.1% 99.0%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.53 36.0 3.37e-01 76.9% 53.3%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.87e-01 81.5% 100.0%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 2.95e-01 87.7% 43.1%
3weeB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 39.0 2.93e-01 81.5% 39.8%
4j2gA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.52 42.0 3.07e-01 93.8% 68.8%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.52 43.0 3.68e-01 95.4% 75.7%
1wp5A00 2.120.10.90 Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal 0.52 42.0 2.77e-01 95.4% 26.4%
1t9mA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 2.97e-01 89.2% 70.6%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.36e-01 92.3% 92.0%
3b70A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 42.0 3.27e-01 98.5% 90.4%
1grjA02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.51 36.0 3.52e-01 78.5% 94.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.70e-01 78.5% 93.5%
4hscX04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.51 42.0 3.61e-01 95.4% 76.4%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.51 42.0 3.75e-01 96.9% 66.3%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 40.0 3.44e-01 86.2% 83.8%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.50 36.0 4.00e-01 84.6% 100.0%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.50 41.0 3.47e-01 95.4% 90.0%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 3.34e-01 93.8% 55.3%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077562 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.62 54.0 5.19e-01 96.9% 88.0%
5030111 375.1.1.12 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.61 43.0 4.38e-01 75.4% 89.1%
3640623 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.59 44.0 3.78e-01 80.0% 55.2%
1175478 4076.2.1.1 ↗ a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH 0.59 39.0 3.81e-01 83.1% 61.1%
1814316 11.1.1.340 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › OmcA-like_N 0.59 49.0 3.58e-01 95.4% 86.6%
3449628 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.58 48.0 3.94e-01 89.2% 65.2%
3420315 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.57 45.0 3.25e-01 89.2% 37.0%
224066 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.57 43.0 4.08e-01 84.6% 70.1%
3504295 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.56 45.0 3.44e-01 89.2% 61.3%
4217174 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 40.0 3.95e-01 93.8% 71.4%
4321315 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.56 46.0 2.97e-01 95.4% 65.2%
3340123 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.55 38.0 3.52e-01 75.4% 55.6%
3377737 4.1.1.302 ↗ beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.54 41.0 3.53e-01 83.1% 93.3%
3603684 275.1.1.1 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.54 39.0 3.89e-01 95.4% 74.3%
3215084 11.1.1.813 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS4_C 0.54 44.0 3.61e-01 95.4% 59.2%
3664232 12.5.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › DUF1191 0.54 37.0 2.75e-01 89.2% 25.3%
3283665 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 42.0 3.21e-01 86.2% 72.1%
5032809 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.53 41.0 3.33e-01 84.6% 46.9%
2562097 3799.1.1.1 ↗ alpha bundles › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA_adhesion 0.53 41.0 2.65e-01 86.2% 23.5%
3888395 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.53 39.0 3.67e-01 81.5% 95.2%
3552373 10.2.1.31 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin 0.52 44.0 3.76e-01 96.9% 60.9%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.52 40.0 4.17e-01 90.8% 90.0%
5010546 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.52 39.0 3.38e-01 84.6% 66.4%
3753826 11.1.1.396 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig 0.52 43.0 3.89e-01 93.8% 74.4%
5054792 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.52 37.0 3.47e-01 86.2% 60.0%
3692094 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.52 43.0 3.23e-01 93.8% 77.7%
3942510 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.52 39.0 3.52e-01 84.6% 91.6%
3469360 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.51 39.0 3.67e-01 83.1% 90.0%
3992042 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.43e-01 81.5% 70.5%
4977038 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 42.0 3.73e-01 95.4% 68.0%
3238303 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.55e-01 93.8% 76.4%
5027909 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 32.0 3.33e-01 81.5% 70.0%
3680066 10.10.1.5 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 0.50 41.0 3.20e-01 93.8% 88.4%
3502194 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.50 37.0 3.42e-01 84.6% 71.6%
3826611 12.5.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › DUF1191 0.50 38.0 2.72e-01 84.6% 27.2%
3440667 1.1.2.8 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 0.50 37.0 3.73e-01 81.5% 100.0%
3175589 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.50 39.0 2.57e-01 89.2% 35.8%
3973332 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 39.0 3.78e-01 89.2% 74.7%