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hypothetical_protein

Euk-Vir

Trichoplusia_ni_granulovirus_LBIV-12

hypothetical_protein__YP_009506121__Trichoplusia_ni_granulovirus_LBIV-12__1916701

Identity

Accession:
YP_009506121 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

50.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 538-658
PDB
D2 medium residues 19-49_111-156
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c65A00 3.30.420.340 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain 0.51 35.0 2.85e-01 71.4% 82.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3268269 4044.1.1.0 alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.54 41.0 3.81e-01 81.8% 83.0%
2549596 6091.1.1.2 alpha bundles › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › Helical bundle domain in Endo-alpha-N-acetylgalactosaminidase › SpGH101_helical 0.50 36.0 3.72e-01 79.2% 81.3%
D3 medium residues 50-110_157-247
PDB
D4 medium residues 280-405
PDB
D5 medium residues 430-537
PDB