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hypothetical_protein

Euk-Vir

Rhinolophus_gammaherpesvirus_1

hypothetical_protein__YP_009551823__Rhinolophus_gammaherpesvirus_1__2054179

Identity

Accession:
YP_009551823 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

83.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Rhinolophus_gammaherpesvirus_1

TaxID: 2054179

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-157
PDB
Domain cluster: rep: hypothetical_protein_RHVP.11__YP_004207851__Cricetid_gammaherpesvirus_2__1605972__D11-122
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 67.5 1.40e-18 93.3% 29.6%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1opoA02 2.60.40.1780 Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein 0.70 48.0 5.13e-01 97.5% 81.6%
3vgfA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 36.0 4.65e-01 99.2% 100.0%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.65 25.0 2.90e-01 100.0% 47.1%
5e1qA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 48.0 5.24e-01 100.0% 97.9%
3amkA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 47.0 5.14e-01 100.0% 94.0%
3dhuA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 39.0 4.69e-01 99.2% 97.3%
2w47A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 49.0 4.74e-01 100.0% 74.1%
5do8B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 39.0 4.69e-01 100.0% 98.7%
1sznA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 46.0 4.94e-01 100.0% 93.1%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 46.0 4.54e-01 100.0% 74.0%
3zxaC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 4.21e-01 86.7% 85.7%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 3.60e-01 84.2% 53.5%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.60 53.0 4.76e-01 100.0% 96.0%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 44.0 4.45e-01 100.0% 78.0%
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 4.80e-01 84.2% 97.0%
4mtmA01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 43.0 4.74e-01 100.0% 96.9%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 40.0 4.11e-01 100.0% 74.1%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.29e-01 84.2% 96.4%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 4.52e-01 100.0% 85.2%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.06e-01 85.0% 96.8%
1yjdC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 4.35e-01 84.2% 83.1%
3km3B00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.56 51.0 4.65e-01 100.0% 82.7%
1n26A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 4.10e-01 85.0% 85.6%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.54 48.0 3.67e-01 100.0% 56.9%
3unpA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 49.0 4.19e-01 100.0% 67.4%
4ekjA01 2.60.40.1500 Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 0.54 49.0 4.55e-01 100.0% 88.3%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 37.0 4.16e-01 84.2% 97.6%
2xsgB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 47.0 3.65e-01 100.0% 78.9%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.81e-01 95.8% 78.1%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.75e-01 95.8% 79.3%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.96e-01 93.3% 93.1%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.52 47.0 4.56e-01 100.0% 99.3%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 34.0 3.82e-01 92.5% 87.0%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 47.0 3.58e-01 100.0% 45.6%
3kljA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.52 29.0 3.37e-01 92.5% 77.1%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 33.0 3.98e-01 100.0% 97.5%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 4.17e-01 92.5% 91.3%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.51 46.0 4.21e-01 100.0% 84.3%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.51 39.0 4.16e-01 99.2% 95.1%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.63e-01 100.0% 75.4%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 32.0 3.43e-01 94.2% 72.6%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 26.0 3.44e-01 90.8% 92.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1723239 10.42.1.1 ↗ beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain › Carmo_coat_C 0.70 48.0 5.15e-01 97.5% 82.4%
4989636 12.1.1.7 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C 0.66 37.0 4.68e-01 100.0% 98.5%
4021809 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.65 47.0 5.30e-01 99.2% 100.0%
4020338 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.63 48.0 5.11e-01 100.0% 92.4%
3494637 10.40.1.1 ↗ beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.62 48.0 4.55e-01 91.7% 67.6%
2443962 12.6.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C 0.61 43.0 4.50e-01 100.0% 79.6%
5053195 10.12.1.98 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.60 44.0 4.33e-01 100.0% 72.8%
1697323 4182.1.1.2 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › H_lectin 0.59 45.0 4.83e-01 84.2% 95.0%
4017299 10.12.1.53 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.57 39.0 3.10e-01 71.7% 95.6%
4968717 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.56 34.0 4.10e-01 90.8% 96.0%
4939079 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 33.0 3.92e-01 91.7% 92.0%
3727262 12.6.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C 0.54 33.0 3.89e-01 100.0% 88.7%
3249088 12.3.1.46 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.54 49.0 4.02e-01 100.0% 67.3%
4962615 319.1.1.4 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.54 36.0 4.05e-01 96.7% 87.4%
5063608 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.53 34.0 3.89e-01 93.3% 87.6%
4946267 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 34.0 3.89e-01 93.3% 87.8%
4932472 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 35.0 3.94e-01 92.5% 86.3%
4947251 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 34.0 3.53e-01 93.3% 68.7%
4602213 319.1.1.23 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 0.52 34.0 3.72e-01 92.5% 81.1%
4267538 11.1.5.31 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › FimH_man-bind 0.52 45.0 4.08e-01 98.3% 80.6%
4980371 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 34.0 3.86e-01 92.5% 89.8%
5052436 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 33.0 3.90e-01 91.7% 98.8%
5049686 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 46.0 4.35e-01 100.0% 89.7%
4026674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.50 32.0 3.73e-01 84.2% 96.2%
4024840 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.50 38.0 3.73e-01 89.2% 73.3%
D2 high residues 166-280
PDB
Domain cluster: rep: virion_protein_G11__NP_042609__Equid_gammaherpesvirus_2__12657__D205-255_277-312
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 83.7 1.70e-23 100.0% 32.3%
D3 medium residues 296-383
PDB
Domain cluster: rep: GP72__YP_007417837__Caviid_betaherpesvirus_2__33706__D239-337
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04797.19 best Herpes_ORF11 77.8 1.00e-21 100.0% 23.7%