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hypothetical_protein

Euk-Vir

Rhinolophus_gammaherpesvirus_1

hypothetical_protein__YP_009551829__Rhinolophus_gammaherpesvirus_1__2054179

Identity

Accession:: YP_009551829 ↗
Protein ID:: hypothetical_protein
Kingdom:: euk

Quality

79.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Rhinolophus_gammaherpesvirus_1

TaxID: 2054179

Cluster

View cluster (77 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 133-212_353-461_529-551

PDB

Domain cluster: rep: DNA_packaging_tegument_protein_UL25__YP_009054940__Equid_alphaherpesvirus_3__80341__D158-233_380-417_449-491_503-595

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	118.9	3.40e-34	58.0%	24.3%
PF01499.22	Herpes_UL25	102.5	3.20e-29	39.6%	13.9%

D2 medium residues 462-528

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01499.22 best	Herpes_UL25	69.3	3.80e-19	100.0%	12.6%

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4h63K00	1.10.287.3490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.81	57.0	4.96e-01	73.1%	53.1%
1zhcA00	6.10.280.50	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.73	52.0	5.03e-01	76.1%	69.7%
4mudC00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.72	56.0	3.87e-01	86.6%	25.5%
1hs7A00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.68	55.0	4.84e-01	86.6%	66.0%
4ielA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.66	55.0	4.62e-01	94.0%	83.6%
1lfkA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.64	56.0	3.47e-01	95.5%	51.5%
1z72A00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.59	50.0	3.57e-01	97.0%	78.7%
1tfeA02	1.10.286.20	Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 ›	0.55	30.0	3.59e-01	79.1%	77.8%
2bnlC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.55	42.0	3.36e-01	82.1%	72.4%
2in3A02	1.10.472.60	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › putative protein disulfide isomerase domain	0.52	35.0	2.87e-01	70.1%	63.4%
2w3cA01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.51	42.0	2.91e-01	98.5%	41.9%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3546135	10.12.1.108 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › POPDC1-3	0.88	61.0	5.87e-01	71.6%	88.0%
4026926	604.7.1.1 ↗	alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA	0.75	58.0	4.52e-01	82.1%	82.2%
2722164	4275.1.1.6 ↗	alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube	0.74	57.0	4.05e-01	82.1%	90.3%
3832084	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.74	52.0	5.05e-01	80.6%	66.7%
3534921	5001.1.1.54 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc	0.72	63.0	4.20e-01	95.5%	47.7%
2075294	3712.1.1.1 ↗	a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11	0.72	55.0	4.80e-01	82.1%	67.7%
3926370	5001.1.1.44 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv	0.70	50.0	3.22e-01	74.6%	27.8%
3270112	109.1.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C	0.70	60.0	4.17e-01	94.0%	47.1%
3636816	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.70	52.0	3.41e-01	79.1%	32.0%
4154261	149.1.1.1 ↗	alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450	0.66	59.0	3.54e-01	95.5%	47.7%
3180930	3652.1.1.7 ↗	alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › 2TM_P5A-ATPase	0.65	46.0	4.57e-01	73.1%	81.4%
3691871	103.1.1.105 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › 2TM_P5A-ATPase	0.65	46.0	4.57e-01	74.6%	82.9%
3571073	633.12.1.11 ↗	alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › TRP_2	0.63	53.0	4.79e-01	97.0%	81.1%
3706306	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.63	52.0	4.31e-01	92.5%	80.8%
3216070	5001.1.1.44 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv	0.61	54.0	3.46e-01	100.0%	69.1%
4022819	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.59	49.0	3.68e-01	92.5%	65.3%
5027346	3718.1.1.0 ↗	alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT	0.50	36.0	3.63e-01	95.5%	78.5%