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hypothetical_protein

Euk-Vir

Rhinolophus_gammaherpesvirus_1

hypothetical_protein__YP_009551834__Rhinolophus_gammaherpesvirus_1__2054179

Identity

Accession:
YP_009551834 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

69.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 224-354
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03043.21 best Herpes_UL87 100.3 1.60e-28 100.0% 24.9%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lc5A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 39.0 3.29e-01 72.5% 92.0%
2hiyA02 3.30.70.1260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like 0.51 28.0 3.28e-01 93.9% 75.0%
D2 medium residues 7-18_82-137
PDB
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959127 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 42.0 3.24e-01 79.4% 60.0%
D3 medium residues 30-81_138-219
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3juiA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 44.0 4.13e-01 88.1% 71.8%
6xu2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 44.0 2.85e-01 85.8% 33.9%
5jj6B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 35.0 3.91e-01 89.6% 88.5%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.51 39.0 3.78e-01 88.1% 72.1%
7ocsB01 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.51 44.0 4.10e-01 97.0% 76.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255571 109.4.1.27 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 0.58 48.0 4.36e-01 88.1% 88.3%
3698008 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 39.0 4.47e-01 94.8% 98.0%
4001244 109.4.1.1955 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_2nd 0.55 37.0 3.48e-01 88.1% 55.8%
4462213 109.4.1.1386 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ints3_N, HEAT_Ints3_C 0.52 43.0 2.88e-01 92.5% 26.1%
3583221 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 36.0 3.44e-01 90.3% 58.8%
3651072 109.4.1.1241 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIR3_bundle 0.50 43.0 3.14e-01 92.5% 35.6%
D4 medium residues 608-709
PDB