hypothetical_protein

Euk-Vir

Rhinolophus_gammaherpesvirus_1

hypothetical_protein__YP_009551880__Rhinolophus_gammaherpesvirus_1__2054179

Identity

79.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Rhinolophus_gammaherpesvirus_1

TaxID: 2054179

View cluster (9 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-123

PDB

Domain cluster: rep: ORF66__YP_009173946__Felis_catus_gammaherpesvirus_1__1452540__D39-151

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1r2jA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.51	32.0	3.05e-01	74.8%	52.8%
3f4mA00	1.20.1440.160	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like	0.50	37.0	3.48e-01	83.7%	61.0%
8b70A01	1.20.1740.10	Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I	0.50	43.0	3.11e-01	99.2%	62.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3453526	3930.1.1.0 ↗	alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase	0.57	42.0	4.20e-01	85.4%	75.2%
1720319	4040.1.1.1 ↗	alpha bundles › Fic-like › Fic-like › Fic-like › Fic	0.56	36.0	3.96e-01	85.4%	80.0%
3295189	5041.1.1.0 ↗	extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C	0.54	45.0	4.14e-01	91.9%	75.8%
3930174	168.1.1.1 ↗	alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7	0.54	36.0	3.43e-01	82.9%	54.8%
3231103	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.50	40.0	2.56e-01	85.4%	18.4%
3727148	7523.1.1.19 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1	0.50	43.0	3.65e-01	92.7%	77.1%
5048327	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.50	42.0	3.58e-01	90.2%	58.0%

D2 medium residues 140-250

PDB

D3 medium residues 262-332

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03117.21 best	Herpes_UL49_1	113.0	2.10e-32	98.6%	28.4%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6inxA02	3.10.50.10	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.52	30.0	3.12e-01	76.1%	60.0%
6rwcA02	2.20.25.590	Mainly Beta › Single Sheet › N-terminal domain of TfIIb ›	0.51	27.0	3.27e-01	80.3%	87.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3790194	284.2.1.0 ↗	a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain	0.53	24.0	2.92e-01	80.3%	60.0%

D4 medium residues 333-410

PDB

Domain cluster: rep: protein_UL49__NP_042663__Equid_gammaherpesvirus_2__12657__D297-319_378-456

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03117.21 best	Herpes_UL49_1	65.4	7.60e-18	96.2%	33.6%