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hypothetical_protein
Euk-VirLonomia_obliqua_multiple_nucleopolyhedrovirus
hypothetical_protein__YP_009666441__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394
Identity
- Accession:
- YP_009666441 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
76.0
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Lonomia_obliqua_multiple_nucleopolyhedrovirus
TaxID: 134394
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-160
Domain cluster:
rep: ORF140__YP_003517880__Lymantria_xylina_nucleopolyhedrovirus__166921__D89-241
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17610.8 best | DUF5505 | 106.0 | 2.70e-30 | 99.4% | 96.2% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lo6A00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 35.0 | 3.60e-01 | 96.9% | 51.3% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.65 | 31.0 | 3.18e-01 | 92.5% | 44.2% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 29.0 | 2.71e-01 | 96.2% | 31.9% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.63 | 36.0 | 3.91e-01 | 98.1% | 66.9% |
| 1qu3A04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.62 | 35.0 | 3.68e-01 | 96.2% | 58.7% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.61 | 30.0 | 3.73e-01 | 96.9% | 75.5% |
| 2xtzA02 | 1.10.400.10 | Mainly Alpha › Orthogonal Bundle › GI Alpha 1, domain 2-like › GI Alpha 1, domain 2-like | 0.59 | 43.0 | 4.76e-01 | 84.4% | 94.4% |
| 7e4mA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 32.0 | 2.67e-01 | 80.0% | 29.7% |
| 1y8aA02 | 1.10.3870.10 | Mainly Alpha › Orthogonal Bundle › AF1437-like domain fold › AF1437-like domain superfamily | 0.59 | 33.0 | 3.78e-01 | 92.5% | 73.3% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 26.0 | 3.19e-01 | 93.1% | 63.7% |
| 6wv5A01 | 1.20.1440.130 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain | 0.57 | 35.0 | 3.84e-01 | 98.1% | 72.8% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 38.0 | 4.04e-01 | 85.6% | 77.0% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 34.0 | 3.99e-01 | 92.5% | 89.0% |
| 6vq6G02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.53 | 32.0 | 3.09e-01 | 100.0% | 52.2% |
| 1qmgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 46.0 | 3.80e-01 | 94.4% | 77.8% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.53 | 47.0 | 3.51e-01 | 98.8% | 95.5% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.53 | 39.0 | 3.70e-01 | 93.1% | 63.4% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.52 | 23.0 | 3.09e-01 | 94.4% | 75.3% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 35.0 | 4.02e-01 | 73.1% | 95.6% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 35.0 | 4.10e-01 | 100.0% | 99.1% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.51 | 38.0 | 3.93e-01 | 81.2% | 80.4% |
| 2di3B02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.51 | 34.0 | 3.51e-01 | 87.5% | 69.0% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.51 | 25.0 | 3.46e-01 | 92.5% | 94.9% |
| 7sl9A01 | 1.20.1730.10 | Mainly Alpha › Up-down Bundle › Sodium/glucose cotransporter › Sodium/glucose cotransporter | 0.51 | 45.0 | 3.23e-01 | 98.1% | 62.7% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.50 | 33.0 | 3.35e-01 | 80.0% | 65.2% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 37.0 | 3.85e-01 | 76.2% | 100.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614644 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 38.0 | 4.47e-01 | 100.0% | 77.3% |
| 3438212 | 601.1.1.54 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF4220 | 0.66 | 38.0 | 3.93e-01 | 100.0% | 58.7% |
| 3173503 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.64 | 38.0 | 3.15e-01 | 100.0% | 32.6% |
| 4454176 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.64 | 32.0 | 2.93e-01 | 98.1% | 35.6% |
| 3930031 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.64 | 36.0 | 3.70e-01 | 100.0% | 55.5% |
| 4023276 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.61 | 36.0 | 3.73e-01 | 96.9% | 60.6% |
| 3485817 | 109.4.1.108 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CTNNBL | 0.60 | 32.0 | 2.20e-01 | 98.8% | 13.9% |
| 3171139 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.57 | 34.0 | 3.24e-01 | 97.5% | 48.6% |
| 3807209 | 148.1.3.56 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Arv1 | 0.57 | 35.0 | 3.43e-01 | 96.2% | 53.4% |
| 3422310 | 150.1.1.87 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Erg28 | 0.57 | 41.0 | 4.48e-01 | 75.6% | 88.1% |
| 3214722 | 5001.1.1.63 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab | 0.56 | 41.0 | 3.21e-01 | 100.0% | 36.3% |
| 3401257 | 192.15.1.92 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › TRC8_N | 0.51 | 31.0 | 3.39e-01 | 96.2% | 72.3% |
| 3602572 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 35.0 | 3.73e-01 | 96.2% | 78.5% |
| 3347110 | 3684.1.1.2 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 | 0.50 | 43.0 | 3.79e-01 | 93.1% | 88.5% |