←Back to structures
hypothetical_protein
Euk-VirBracoviriform_demolitoris
hypothetical_protein__YP_239364__Bracoviriform_demolitoris__53988
Identity
- Accession:
- YP_239364 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 123-247
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10523.16 best | BEN | 61.7 | 8.80e-17 | 61.6% | 100.0% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ix7A00 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.81 | 66.0 | 6.91e-01 | 91.2% | 92.1% |
| 7yulA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.81 | 54.0 | 6.49e-01 | 83.2% | 100.0% |
| 7yugA01 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.81 | 69.0 | 7.27e-01 | 94.4% | 99.1% |
| 1tt5B02 | 1.10.10.520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 0.64 | 37.0 | 4.53e-01 | 70.4% | 92.2% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 47.0 | 4.47e-01 | 100.0% | 74.5% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 46.0 | 4.42e-01 | 100.0% | 76.8% |
| 1e6vB02 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.56 | 48.0 | 3.68e-01 | 94.4% | 66.1% |
| 3g7rA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 45.0 | 3.97e-01 | 100.0% | 59.3% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.53 | 31.0 | 3.42e-01 | 72.0% | 68.7% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.51 | 33.0 | 3.52e-01 | 97.6% | 76.2% |
| 8agyA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.50 | 45.0 | 3.56e-01 | 96.0% | 75.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3906482 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.87 | 75.0 | 7.80e-01 | 91.2% | 97.4% |
| 3882062 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.85 | 64.0 | 6.96e-01 | 83.2% | 92.4% |
| 3882554 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.84 | 72.0 | 7.56e-01 | 89.6% | 100.0% |
| 3920858 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.84 | 68.0 | 7.42e-01 | 88.8% | 100.0% |
| 3542946 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.84 | 68.0 | 6.57e-01 | 91.2% | 76.3% |
| 3393516 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.83 | 67.0 | 7.20e-01 | 91.2% | 95.5% |
| 3910609 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.82 | 70.0 | 7.05e-01 | 89.6% | 88.8% |
| 224085 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.81 | 66.0 | 6.91e-01 | 91.2% | 92.1% |
| 3881398 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 65.0 | 6.95e-01 | 87.2% | 95.5% |
| 3560070 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.80 | 65.0 | 7.03e-01 | 89.6% | 100.0% |
| 3926647 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 52.0 | 5.04e-01 | 88.0% | 77.1% |
| 5018481 | 2004.1.1.136 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 | 0.57 | 42.0 | 3.24e-01 | 76.0% | 97.9% |
| 3282087 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 41.0 | 3.52e-01 | 75.2% | 47.0% |
| 3592769 | 10.12.1.9 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC | 0.51 | 41.0 | 2.91e-01 | 86.4% | 74.4% |
D2
medium
residues 1-52