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hypothetical_protein
Euk-VirNeodiprion_abietis_NPV
hypothetical_protein__YP_667863__Neodiprion_abietis_NPV__204507
Identity
- Accession:
- YP_667863 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
73.7
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Gammabaculovirus›
Neodiprion_abietis_nucleopolyhedrovirus
TaxID: 204507
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-98
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ezgA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 64.0 | 4.86e-01 | 100.0% | 54.6% |
| 4wp6A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 63.0 | 5.04e-01 | 97.4% | 65.6% |
| 4b8cJ01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 63.0 | 4.65e-01 | 100.0% | 50.3% |
| 1zbsA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 43.0 | 4.07e-01 | 71.8% | 100.0% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.60 | 51.0 | 3.70e-01 | 97.4% | 89.0% |
| 1edzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 50.0 | 4.08e-01 | 96.2% | 75.6% |
| 1m2vB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.59 | 49.0 | 3.63e-01 | 97.4% | 88.6% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.59 | 50.0 | 3.69e-01 | 97.4% | 93.7% |
| 1l7eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 49.0 | 3.85e-01 | 94.9% | 80.2% |
| 3i5xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 3.64e-01 | 100.0% | 62.3% |
| 4xjvA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 48.0 | 3.56e-01 | 94.9% | 60.6% |
| 2qipA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.58 | 49.0 | 3.90e-01 | 94.9% | 91.3% |
| 4igiA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 45.0 | 3.50e-01 | 96.2% | 81.7% |
| 4xa8A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 46.0 | 4.02e-01 | 93.6% | 69.5% |
| 4py5A02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 46.0 | 3.45e-01 | 94.9% | 68.2% |
| 6snkA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.53 | 44.0 | 3.44e-01 | 94.9% | 87.0% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 41.0 | 3.86e-01 | 85.9% | 70.8% |
| 5d84A02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.60e-01 | 85.9% | 64.0% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3726066 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.75 | 68.0 | 4.09e-01 | 100.0% | 23.8% |
| 3223053 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.73 | 66.0 | 4.91e-01 | 100.0% | 58.5% |
| 3420676 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.73 | 65.0 | 4.44e-01 | 100.0% | 39.9% |
| 3448419 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.73 | 66.0 | 4.55e-01 | 100.0% | 40.8% |
| 3367906 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.73 | 65.0 | 4.34e-01 | 98.7% | 27.8% |
| 3256850 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.72 | 65.0 | 4.17e-01 | 98.7% | 22.6% |
| 3255989 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.72 | 64.0 | 3.76e-01 | 98.7% | 12.2% |
| 3607045 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 64.0 | 4.21e-01 | 100.0% | 32.1% |
| 3466252 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 64.0 | 3.85e-01 | 100.0% | 21.0% |
| 3927352 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 63.0 | 4.39e-01 | 98.7% | 38.8% |
| 3444450 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 62.0 | 4.69e-01 | 96.2% | 44.8% |
| 3692330 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 63.0 | 4.23e-01 | 100.0% | 30.5% |
| 3424735 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 64.0 | 4.08e-01 | 100.0% | 29.9% |
| 3577264 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 63.0 | 5.08e-01 | 98.7% | 62.7% |
| 3456910 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 61.0 | 5.64e-01 | 96.2% | 84.0% |
| 3660085 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.70 | 63.0 | 4.04e-01 | 100.0% | 31.6% |
| 3660800 | 207.1.1.133 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 | 0.70 | 62.0 | 4.29e-01 | 100.0% | 40.4% |
| 3432723 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.70 | 62.0 | 4.43e-01 | 100.0% | 46.7% |
| 3833376 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 63.0 | 4.82e-01 | 100.0% | 61.7% |
| 3451797 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.70 | 63.0 | 4.19e-01 | 100.0% | 37.7% |
| 3680993 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 63.0 | 4.62e-01 | 100.0% | 52.7% |
| 3368470 | 207.1.1.143 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 | 0.70 | 63.0 | 4.30e-01 | 100.0% | 36.7% |
| 3209966 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.70 | 61.0 | 4.27e-01 | 97.4% | 37.3% |
| 3670674 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.69 | 62.0 | 4.51e-01 | 98.7% | 37.6% |
| 3308867 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.69 | 63.0 | 4.43e-01 | 100.0% | 39.1% |
| 3399207 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 62.0 | 4.00e-01 | 100.0% | 24.5% |
| 3442282 | 207.1.1.143 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 | 0.69 | 62.0 | 3.96e-01 | 98.7% | 21.4% |
| 3438081 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.69 | 63.0 | 4.62e-01 | 100.0% | 44.0% |
| 3463974 | 207.1.1.194 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14, LRR_R13L1-DRL21 | 0.69 | 61.0 | 4.03e-01 | 98.7% | 29.5% |
| 3362717 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.69 | 62.0 | 4.23e-01 | 100.0% | 41.5% |
| 3384978 | 207.1.1.100 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 | 0.69 | 62.0 | 4.61e-01 | 100.0% | 52.3% |
| 3819923 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.69 | 62.0 | 4.21e-01 | 100.0% | 36.4% |
| 3267496 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.69 | 61.0 | 3.54e-01 | 98.7% | 12.2% |
| None | — | 0.68 | 62.0 | 3.85e-01 | 100.0% | 25.5% | |
| 3642297 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.67 | 61.0 | 4.51e-01 | 100.0% | 55.4% |
| 3925587 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 59.0 | 3.83e-01 | 98.7% | 34.2% |
| 3225057 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.67 | 58.0 | 4.41e-01 | 97.4% | 52.4% |
| 3786316 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 58.0 | 4.66e-01 | 97.4% | 61.7% |
| 3930714 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.66 | 56.0 | 5.53e-01 | 96.2% | 100.0% |
| 3809639 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.65 | 58.0 | 4.14e-01 | 100.0% | 62.1% |
| 3885740 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 53.0 | 4.44e-01 | 98.7% | 72.9% |
| 5077424 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 48.0 | 3.50e-01 | 96.2% | 39.2% |
| 3768874 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.57 | 48.0 | 3.62e-01 | 97.4% | 78.5% |
| 3306676 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.56 | 48.0 | 3.92e-01 | 94.9% | 99.3% |
| 2979135 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.55 | 40.0 | 3.55e-01 | 76.9% | 86.2% |
| 1125306 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.55 | 45.0 | 3.50e-01 | 96.2% | 81.7% |
| 3594922 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 45.0 | 3.77e-01 | 96.2% | 52.9% |
| 4992063 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 45.0 | 3.32e-01 | 96.2% | 65.3% |
| 3543258 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.53 | 44.0 | 3.38e-01 | 98.7% | 78.6% |
| 4013941 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 45.0 | 3.54e-01 | 96.2% | 54.7% |
| 3841897 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.52 | 40.0 | 2.53e-01 | 84.6% | 20.2% |
| 4299161 | 7512.1.1.23 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_52 | 0.50 | 41.0 | 3.56e-01 | 94.9% | 89.5% |
D2
medium
residues 131-253
Domain cluster:
representative
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3370863 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.71 | 53.0 | 3.70e-01 | 100.0% | 25.7% |
| 3337552 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 53.0 | 3.72e-01 | 100.0% | 26.8% |
| 3273394 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.66 | 47.0 | 3.01e-01 | 100.0% | 15.7% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.61 | 47.0 | 5.13e-01 | 100.0% | 99.0% |
| 3346411 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.59 | 55.0 | 3.81e-01 | 100.0% | 35.1% |
| None | — | 0.58 | 54.0 | 3.63e-01 | 100.0% | 36.6% | |
| None | — | 0.58 | 54.0 | 3.68e-01 | 99.2% | 31.1% | |
| 3829405 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 54.0 | 3.59e-01 | 100.0% | 43.2% |
| None | — | 0.56 | 51.0 | 3.56e-01 | 100.0% | 46.1% | |
| 3964913 | 207.2.1.10 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin | 0.55 | 46.0 | 4.39e-01 | 100.0% | 77.2% |