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hypothetical_protein

Euk-Vir

Neodiprion_abietis_NPV

hypothetical_protein__YP_667883__Neodiprion_abietis_NPV__204507

Identity

Accession:
YP_667883 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

62.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Gammabaculovirus› Neodiprion_abietis_nucleopolyhedrovirus

TaxID: 204507

Cluster

View cluster (46 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 23-144_157-174
PDB
Domain cluster: rep: asb056__YP_009112617__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D48-167
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05674.18 best DUF816 213.6 2.70e-63 100.0% 88.6%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.67 41.0 4.97e-01 92.1% 90.5%
2v0oB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.64 47.0 3.74e-01 75.7% 82.3%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.64 42.0 4.00e-01 70.7% 56.7%
4e40A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.62 45.0 3.70e-01 74.3% 86.9%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 45.0 4.01e-01 76.4% 92.5%
2pmsC00 6.10.140.920 Special › Helix non-globular › Helix Hairpins › 0.61 41.0 4.67e-01 77.9% 88.1%
2d1lA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 46.0 3.75e-01 77.1% 71.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.61 40.0 4.50e-01 73.6% 83.9%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.60 34.0 3.74e-01 73.6% 66.7%
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.59 38.0 4.19e-01 70.7% 79.6%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.57 43.0 4.41e-01 79.3% 82.0%
2q7rB00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.56 43.0 4.31e-01 97.9% 76.9%
2uuiA00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.54 41.0 4.00e-01 100.0% 71.6%
7cj3A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 46.0 3.70e-01 92.9% 87.6%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.50 35.0 3.66e-01 98.6% 77.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2320846 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.78 57.0 5.05e-01 75.0% 85.2%
3167235 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 44.0 4.20e-01 75.7% 50.6%
3209196 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.72 48.0 3.48e-01 70.7% 26.9%
3443143 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.71 49.0 4.57e-01 70.0% 64.0%
3417771 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.70 48.0 4.05e-01 70.0% 53.3%
3990182 3922.1.1.226 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 0.70 46.0 5.09e-01 79.3% 81.7%
5062884 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.69 52.0 4.44e-01 76.4% 92.4%
3619082 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.68 50.0 3.71e-01 75.7% 80.3%
3411948 601.1.1.43 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Serendipity_A 0.67 41.0 4.42e-01 87.9% 70.8%
3799148 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 48.0 4.71e-01 75.0% 78.1%
3255530 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.66 43.0 4.77e-01 72.1% 82.7%
4593595 3835.1.1.0 ↗ alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein 0.64 49.0 4.23e-01 80.0% 95.0%
5003564 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.63 46.0 4.11e-01 75.0% 74.2%
3973899 5086.1.1.92 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE 0.62 46.0 4.57e-01 76.4% 73.1%
3248488 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.62 49.0 3.88e-01 82.9% 86.9%
3168919 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.62 47.0 3.73e-01 80.0% 86.8%
3186506 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.61 51.0 3.66e-01 88.6% 56.6%
3403588 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.60 51.0 4.17e-01 91.4% 89.2%
3831865 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.57 39.0 4.08e-01 88.6% 74.6%
3359325 4207.1.2.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.55 35.0 3.74e-01 77.9% 72.0%
4021316 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 46.0 3.81e-01 91.4% 94.3%
4218519 5045.1.1.1 ↗ alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.53 41.0 3.55e-01 80.7% 79.1%
3395441 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.51 40.0 3.88e-01 83.6% 89.4%