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hypothetical_protein

Euk-Vir

Neodiprion_abietis_NPV

hypothetical_protein__YP_667900__Neodiprion_abietis_NPV__204507

Identity

Accession:
YP_667900 ↗
Protein ID:
hypothetical_protein
Kingdom:
euk

Quality

59.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 113-205
PDB
D2 medium residues 1-51
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13894.13 best zf-C2H2_4 22.0 2.70e-04 47.1% 100.0%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x6hA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.86 54.0 4.44e-01 74.5% 38.4%
4r2qA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.74 54.0 4.38e-01 76.5% 56.8%
2d9hA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.73 52.0 4.46e-01 90.2% 48.7%
6e94A02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.72 52.0 5.08e-01 76.5% 87.5%
4m9vC00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.72 53.0 4.99e-01 78.4% 83.3%
2ghfA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 43.0 3.59e-01 90.2% 42.7%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.57 42.0 3.12e-01 80.4% 93.7%
4hz4A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 37.0 3.19e-01 90.2% 40.5%
2lv2A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.57 50.0 4.25e-01 100.0% 67.1%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 47.0 3.78e-01 98.0% 55.2%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3610348 376.1.2.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF26235 0.83 50.0 4.34e-01 72.5% 41.3%
3703274 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.83 50.0 4.32e-01 70.6% 42.7%
None 0.83 59.0 5.76e-01 74.5% 89.1%
3772816 386.1.1.362 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-H2C2_5 0.83 58.0 5.62e-01 72.5% 89.1%
3229225 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.83 59.0 5.76e-01 74.5% 90.9%
3514160 386.1.1.21 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 59.0 4.90e-01 74.5% 62.5%
3888881 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 53.0 5.17e-01 70.6% 61.8%
3561635 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.82 57.0 5.60e-01 82.4% 67.3%
3495564 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 58.0 5.00e-01 74.5% 65.3%
3843041 386.1.1.234 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 0.82 59.0 4.65e-01 74.5% 53.7%
3411708 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 55.0 5.03e-01 70.6% 56.9%
4452915 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.81 59.0 4.79e-01 76.5% 56.7%
3405416 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.81 58.0 5.66e-01 74.5% 90.9%
3546631 386.1.1.238 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.81 52.0 5.01e-01 70.6% 58.6%
3938869 386.1.1.24 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.81 58.0 5.27e-01 74.5% 76.9%
3502866 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.81 58.0 4.59e-01 74.5% 54.7%
3920268 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.81 59.0 5.20e-01 76.5% 71.4%
3525956 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.81 59.0 5.36e-01 76.5% 76.9%
3396588 386.1.1.238 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.80 55.0 5.32e-01 70.6% 87.3%
3489603 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.80 58.0 5.71e-01 76.5% 90.9%
3508798 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 56.0 5.44e-01 72.5% 90.9%
3398599 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.80 59.0 4.92e-01 76.5% 63.7%
3751405 386.1.1.234 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 0.80 59.0 5.34e-01 76.5% 78.5%
3570654 386.1.1.24 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.80 58.0 4.80e-01 76.5% 59.5%
3508081 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.80 51.0 4.84e-01 88.2% 56.7%
3474753 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.79 58.0 5.27e-01 76.5% 78.5%
3401265 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.79 56.0 5.15e-01 74.5% 75.4%
3472151 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.79 58.0 4.78e-01 76.5% 60.0%
3864004 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.79 57.0 5.51e-01 74.5% 89.1%
4560864 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.79 56.0 5.13e-01 74.5% 78.5%
3626090 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.79 55.0 4.65e-01 72.5% 62.5%
4195872 556.1.1.0 alpha arrays › KRAB domain (Kruppel-associated box, Pfam 01352) › KRAB domain (Kruppel-associated box, Pfam 01352) › KRAB domain (Kruppel-associated box, Pfam 01352) 0.79 56.0 4.20e-01 74.5% 41.7%
3579689 386.1.1.244 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-met 0.79 56.0 4.64e-01 74.5% 58.8%
3879111 386.1.1.311 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_11 0.78 56.0 5.11e-01 74.5% 75.4%
3536405 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.78 57.0 4.31e-01 76.5% 45.5%
4014357 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.78 62.0 5.13e-01 100.0% 50.6%
3881310 386.1.1.233 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2 0.78 57.0 4.58e-01 76.5% 60.0%
3524086 386.1.1.238 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.78 57.0 3.84e-01 76.5% 30.3%
3913924 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 56.0 4.44e-01 76.5% 55.1%
None 0.77 56.0 5.52e-01 76.5% 92.7%
3396586 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 56.0 5.00e-01 76.5% 71.4%
3886235 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 56.0 4.64e-01 76.5% 60.0%
3480522 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 56.0 5.11e-01 76.5% 78.5%
3534450 386.1.1.234 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 0.77 55.0 5.36e-01 74.5% 89.1%
3791965 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 56.0 4.73e-01 76.5% 62.0%
3852494 386.1.1.234 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 0.77 56.0 3.64e-01 76.5% 25.1%
3176318 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 55.0 4.85e-01 76.5% 75.7%
3791372 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.77 55.0 4.61e-01 74.5% 72.5%
3566372 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.77 54.0 4.49e-01 74.5% 57.6%
3412092 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.76 56.0 5.10e-01 76.5% 76.9%
3906667 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.76 55.0 4.58e-01 76.5% 58.8%
3908035 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.76 55.0 3.98e-01 76.5% 37.7%
3539723 386.1.1.305 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6, zf-C2H2_15 0.76 56.0 5.49e-01 78.4% 96.4%
3999354 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.75 55.0 3.81e-01 76.5% 31.6%
3571053 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.75 55.0 4.61e-01 76.5% 61.3%
3531683 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.75 55.0 4.54e-01 76.5% 57.6%
3885252 386.1.1.264 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_jaz 0.75 54.0 5.31e-01 76.5% 89.1%
3861352 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.75 54.0 5.51e-01 100.0% 78.0%
3903023 386.1.1.262 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_16 0.75 54.0 5.28e-01 76.5% 89.1%
None 0.75 55.0 5.41e-01 96.1% 72.7%
3921776 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.74 53.0 5.06e-01 76.5% 66.7%
3841395 386.1.1.233 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2 0.74 54.0 4.57e-01 76.5% 61.3%
3902016 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.74 56.0 4.69e-01 80.4% 49.4%
3182304 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 52.0 5.43e-01 74.5% 100.0%
3221938 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 56.0 5.11e-01 82.4% 86.2%
4001398 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 53.0 4.48e-01 76.5% 61.3%
3492748 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.72 50.0 5.69e-01 88.2% 92.5%
3566826 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.69 51.0 5.16e-01 100.0% 84.0%
3397207 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.69 58.0 4.27e-01 100.0% 40.7%
3474931 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 49.0 3.52e-01 76.5% 32.4%
3791304 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.67 58.0 5.85e-01 94.1% 94.0%
3180512 386.1.1.317 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_fungi 0.66 56.0 5.49e-01 90.2% 94.5%
3901679 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.66 59.0 4.22e-01 96.1% 97.8%
3992176 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.66 48.0 4.08e-01 94.1% 45.6%
3241929 386.1.1.24 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.65 56.0 5.44e-01 94.1% 89.1%
3747670 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.63 50.0 5.06e-01 86.3% 84.0%
3791983 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.62 51.0 5.07e-01 98.0% 94.5%
3868799 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 52.0 4.47e-01 98.0% 58.8%
3519085 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 53.0 5.04e-01 100.0% 80.0%
3203321 386.1.1.133 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 0.59 49.0 4.97e-01 88.2% 94.0%
3894754 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.58 45.0 3.92e-01 96.1% 59.1%
3414000 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 43.0 4.35e-01 98.0% 92.0%
3204101 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 47.0 4.76e-01 92.2% 92.0%
3330830 3238.1.1.1 alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF 0.54 43.0 2.69e-01 100.0% 26.2%
D3 medium residues 52-112
PDB