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hypothetical_protein
Euk-VirNeodiprion_abietis_NPV
hypothetical_protein__YP_667941__Neodiprion_abietis_NPV__204507
Identity
- Accession:
- YP_667941 ↗
- Protein ID:
- hypothetical_protein
- Kingdom:
- euk
Quality
78.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Gammabaculovirus›
Neodiprion_abietis_nucleopolyhedrovirus
TaxID: 204507
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-72
Domain cluster:
rep: hypothetical_protein_NeseNPV_gp90__YP_025197__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D4-69
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01885.23 best | PTS_2-RNA | 36.1 | 9.60e-09 | 98.5% | 42.9% |
D2
high
residues 95-179
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01885.23 best | PTS_2-RNA | 78.2 | 1.20e-21 | 82.3% | 42.4% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfxA02 | 3.20.170.30 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › | 0.85 | 80.0 | 7.86e-01 | 100.0% | 96.7% |
| 7kw8A02 | 3.20.170.30 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › | 0.78 | 68.0 | 6.99e-01 | 92.9% | 100.0% |
| 1htlA00 | 3.90.210.10 | Alpha Beta › Alpha-Beta Complex › Heat-Labile Enterotoxin; Chain A › Heat-Labile Enterotoxin, subunit A | 0.76 | 70.0 | 5.33e-01 | 100.0% | 68.1% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.59 | 43.0 | 3.97e-01 | 96.5% | 60.2% |
| 3e59B02 | 3.30.60.140 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 28.0 | 3.53e-01 | 83.5% | 100.0% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.78e-01 | 70.6% | 86.7% |
| 2b30A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.52 | 40.0 | 3.74e-01 | 83.5% | 84.4% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.52 | 34.0 | 3.93e-01 | 74.1% | 100.0% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 44.0 | 3.53e-01 | 100.0% | 54.7% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 44.0 | 3.64e-01 | 100.0% | 64.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3882775 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.92 | 88.0 | 7.67e-01 | 100.0% | 77.5% |
| 3663669 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.91 | 86.0 | 7.70e-01 | 100.0% | 81.4% |
| 3596575 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.89 | 84.0 | 7.62e-01 | 100.0% | 86.4% |
| 3614840 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.89 | 83.0 | 7.55e-01 | 100.0% | 86.4% |
| 3783359 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.88 | 84.0 | 7.69e-01 | 100.0% | 86.7% |
| 3183175 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.88 | 83.0 | 6.53e-01 | 100.0% | 67.5% |
| 3635641 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.88 | 82.0 | 6.58e-01 | 100.0% | 76.6% |
| 5008044 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.86 | 82.0 | 7.83e-01 | 100.0% | 91.6% |
| 4296568 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.86 | 81.0 | 7.78e-01 | 100.0% | 90.5% |
| 3106804 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.85 | 81.0 | 7.49e-01 | 100.0% | 84.5% |
| 4125268 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.85 | 80.0 | 7.85e-01 | 98.8% | 94.4% |
| 4546240 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 79.0 | 7.74e-01 | 98.8% | 94.4% |
| 5061730 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 78.0 | 7.64e-01 | 97.6% | 93.3% |
| 4303698 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.84 | 79.0 | 7.57e-01 | 98.8% | 90.4% |
| 5060086 | 237.1.1.4 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA | 0.82 | 77.0 | 7.40e-01 | 100.0% | 91.6% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.54 | 36.0 | 4.08e-01 | 76.5% | 100.0% |
| 5012108 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 42.0 | 2.95e-01 | 89.4% | 68.9% |
| 3482676 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.25e-01 | 98.8% | 75.0% |
| 3916235 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.50 | 36.0 | 2.59e-01 | 76.5% | 30.9% |