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hypothetical_protein_ceV_198
Euk-VirChrysochromulina_ericina_virus
hypothetical_protein_ceV_198__YP_009173453__Chrysochromulina_ericina_virus__455364
Identity
- Accession:
- YP_009173453 ↗
- Protein ID:
- hypothetical_protein_ceV_198
- Kingdom:
- euk
Quality
70.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Chrysochromulina_ericina_virus
TaxID: 455364
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 60-118
D2
medium
residues 1-58
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19197.6 best | DUF5872 | 34.4 | 4.00e-08 | 94.8% | 40.4% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 45.0 | 4.34e-01 | 87.9% | 55.9% |
| 1wgxA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 41.0 | 3.86e-01 | 84.5% | 50.7% |
| 2mgwA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 41.0 | 4.25e-01 | 77.6% | 71.2% |
| 7kypE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 46.0 | 3.13e-01 | 87.9% | 20.7% |
| 4uhcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 51.0 | 3.31e-01 | 98.3% | 86.7% |
| 4it1B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 47.0 | 3.52e-01 | 91.4% | 43.8% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.56 | 47.0 | 4.38e-01 | 98.3% | 98.7% |
| 1dj2A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.56 | 43.0 | 3.66e-01 | 84.5% | 71.7% |
| 6elqA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 41.0 | 2.94e-01 | 79.3% | 83.0% |
| 4bpxD00 | 1.20.930.80 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.55 | 45.0 | 3.12e-01 | 94.8% | 31.9% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.54 | 43.0 | 3.59e-01 | 91.4% | 55.4% |
| 1cw1A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.54 | 38.0 | 2.38e-01 | 77.6% | 65.3% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.51 | 42.0 | 3.12e-01 | 93.1% | 39.0% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 36.0 | 3.44e-01 | 93.1% | 66.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705990 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 58.0 | 5.32e-01 | 82.8% | 78.7% |
| 3496286 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 41.0 | 4.65e-01 | 82.8% | 100.0% |
| 3351421 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 42.0 | 4.21e-01 | 84.5% | 61.7% |
| 3231425 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.65 | 42.0 | 4.22e-01 | 87.9% | 65.0% |
| 3487056 | 627.1.1.0 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain | 0.61 | 48.0 | 3.59e-01 | 91.4% | 40.0% |
| 5051841 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.59 | 44.0 | 3.87e-01 | 79.3% | 92.9% |
| 5044325 | 4125.1.1.0 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like | 0.58 | 41.0 | 4.04e-01 | 77.6% | 90.8% |
| 3942635 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.58 | 42.0 | 3.18e-01 | 93.1% | 31.0% |
| 3280908 | 4274.1.1.5 ↗ | extended segments › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › PF28792 | 0.54 | 39.0 | 3.91e-01 | 79.3% | 78.3% |
| 3504408 | 6132.1.1.1 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix_N | 0.52 | 39.0 | 3.94e-01 | 84.5% | 93.3% |