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hypothetical_protein_crov274
Euk-VirCafeteria_roenbergensis_virus_BV-PW1
hypothetical_protein_crov274__YP_003969906__Cafeteria_roenbergensis_virus_BV-PW1__693272
Identity
- Accession:
- YP_003969906 ↗
- Protein ID:
- hypothetical_protein_crov274
- Kingdom:
- euk
Quality
51.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Rheavirus›
Cafeteria_roenbergensis_virus_BV-PW1
TaxID: 693272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 139-212
D2
medium
residues 302-385
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 57.0 | 3.97e-01 | 96.4% | 60.1% |
| 8dgfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 37.0 | 2.87e-01 | 70.2% | 57.6% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.54 | 41.0 | 3.04e-01 | 83.3% | 58.0% |
| 2akjA01 | 3.90.480.20 | Alpha Beta › Alpha-Beta Complex › Sulfite Reductase Hemoprotein; domain 2 › | 0.50 | 37.0 | 2.76e-01 | 79.8% | 48.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3463832 | 386.1.1.334 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Utp11 | 0.75 | 55.0 | 4.71e-01 | 76.2% | 64.6% |
| 3638257 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.74 | 56.0 | 4.98e-01 | 81.0% | 82.5% |
| 3819754 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.69 | 62.0 | 4.86e-01 | 100.0% | 51.1% |
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.64 | 57.0 | 4.96e-01 | 100.0% | 73.8% |
| 5058661 | 304.55.1.14 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp | 0.61 | 42.0 | 3.62e-01 | 70.2% | 46.2% |
| 3305761 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 42.0 | 3.49e-01 | 90.5% | 56.1% |