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hypothetical_protein_crov406
Euk-VirCafeteria_roenbergensis_virus_BV-PW1
hypothetical_protein_crov406__YP_003970039__Cafeteria_roenbergensis_virus_BV-PW1__693272
Identity
- Accession:
- YP_003970039 ↗
- Protein ID:
- hypothetical_protein_crov406
- Kingdom:
- euk
Quality
84.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Rheavirus›
Cafeteria_roenbergensis_virus_BV-PW1
TaxID: 693272
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 205-304
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4arnA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.75 | 65.0 | 4.60e-01 | 100.0% | 33.2% |
| 4nzrM02 | 2.160.20.180 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.71 | 58.0 | 4.70e-01 | 98.0% | 47.3% |
| 2ra8A02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.69 | 62.0 | 4.47e-01 | 99.0% | 40.0% |
| 2z7xB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 60.0 | 3.78e-01 | 100.0% | 25.6% |
| 2xwtC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 58.0 | 4.39e-01 | 100.0% | 46.2% |
| 4cd8A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 54.0 | 3.85e-01 | 100.0% | 53.4% |
| 3sq3A01 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.60 | 46.0 | 3.78e-01 | 85.0% | 44.5% |
| 3sqlA02 | 3.40.50.10870 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 | 0.58 | 50.0 | 4.34e-01 | 95.0% | 73.9% |
| 1o8uC00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 51.0 | 3.85e-01 | 100.0% | 70.0% |
| 1d4oA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.57 | 49.0 | 4.07e-01 | 94.0% | 80.8% |
| 3omeB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 49.0 | 3.76e-01 | 98.0% | 63.2% |
| 1ez4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 48.0 | 4.30e-01 | 95.0% | 100.0% |
| 1r0sA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 4.46e-01 | 96.0% | 84.1% |
| 1eucA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.56 | 47.0 | 4.03e-01 | 95.0% | 80.6% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 47.0 | 3.84e-01 | 97.0% | 77.2% |
| 1h0hA02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 48.0 | 3.63e-01 | 95.0% | 50.2% |
| 2agkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.69e-01 | 100.0% | 57.5% |
| 2yc3A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 37.0 | 2.93e-01 | 93.0% | 32.9% |
| 2dxnA02 | 3.30.750.180 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › GpdQ, beta-strand dimerisation domain | 0.54 | 48.0 | 4.48e-01 | 100.0% | 92.1% |
| 3vaxA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 46.0 | 3.49e-01 | 99.0% | 65.0% |
| 1vpyA00 | 3.20.20.410 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 | 0.53 | 46.0 | 3.54e-01 | 100.0% | 55.0% |
| 3io1A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 42.0 | 3.07e-01 | 86.0% | 81.5% |
| 1ur4A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 46.0 | 3.15e-01 | 100.0% | 43.5% |
| 3l0gA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 41.0 | 3.63e-01 | 97.0% | 56.9% |
| 7wjlA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.52 | 44.0 | 2.92e-01 | 95.0% | 83.9% |
| 2hc9A01 | 3.40.50.10590 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases | 0.52 | 43.0 | 3.83e-01 | 95.0% | 89.0% |
| 1vhkA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.52 | 35.0 | 3.06e-01 | 75.0% | 43.8% |
| 2iv2X02 | 3.40.50.740 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 45.0 | 3.28e-01 | 95.0% | 55.6% |
| 3te6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.46e-01 | 94.0% | 58.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253126 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.82 | 64.0 | 5.39e-01 | 100.0% | 52.3% |
| 3272307 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.79 | 59.0 | 3.70e-01 | 100.0% | 15.9% |
| 3273394 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.79 | 65.0 | 3.94e-01 | 100.0% | 14.9% |
| 3275191 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.79 | 62.0 | 4.06e-01 | 100.0% | 21.0% |
| 3272849 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.79 | 68.0 | 4.13e-01 | 100.0% | 15.5% |
| 3255989 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.76 | 60.0 | 3.63e-01 | 100.0% | 13.3% |
| 3683172 | 207.1.1.100 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 | 0.75 | 62.0 | 4.74e-01 | 100.0% | 40.0% |
| 3468056 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.75 | 59.0 | 4.53e-01 | 98.0% | 38.6% |
| 222214 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.75 | 65.0 | 4.63e-01 | 100.0% | 33.8% |
| 3223053 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.75 | 64.0 | 5.02e-01 | 100.0% | 46.7% |
| 3268939 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.74 | 67.0 | 5.24e-01 | 100.0% | 49.2% |
| 3264277 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.74 | 65.0 | 4.01e-01 | 100.0% | 17.6% |
| 3176655 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.74 | 63.0 | 4.19e-01 | 100.0% | 25.3% |
| 3267793 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.73 | 68.0 | 4.19e-01 | 100.0% | 22.4% |
| 3909050 | 207.1.1.55 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 | 0.73 | 59.0 | 4.31e-01 | 100.0% | 33.5% |
| 3271889 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.72 | 54.0 | 4.11e-01 | 100.0% | 35.1% |
| 3265881 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.72 | 66.0 | 4.10e-01 | 100.0% | 20.1% |
| 3818229 | 207.1.1.183 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_2, FBD, LRR_At5g56370 | 0.70 | 65.0 | 4.26e-01 | 100.0% | 29.2% |
| 3451460 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.70 | 65.0 | 4.40e-01 | 100.0% | 34.3% |
| None | — | 0.70 | 62.0 | 4.08e-01 | 100.0% | 25.0% | |
| 3448886 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.69 | 62.0 | 4.76e-01 | 100.0% | 45.1% |
| 3437828 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.69 | 61.0 | 4.14e-01 | 97.0% | 33.0% |
| 3927352 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 62.0 | 4.57e-01 | 100.0% | 41.6% |
| 3463177 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.67 | 62.0 | 3.96e-01 | 100.0% | 27.6% |
| 3256850 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 62.0 | 4.18e-01 | 100.0% | 33.3% |
| 3257533 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 62.0 | 5.03e-01 | 100.0% | 59.4% |
| 3277328 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 61.0 | 3.73e-01 | 100.0% | 20.3% |
| 3253288 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.67 | 61.0 | 4.68e-01 | 100.0% | 47.3% |
| 3301482 | 207.1.1.77 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBD | 0.67 | 61.0 | 4.28e-01 | 100.0% | 47.4% |
| 3273708 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.66 | 62.0 | 4.61e-01 | 100.0% | 44.8% |
| 3268248 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.66 | 60.0 | 3.82e-01 | 100.0% | 22.0% |
| 3806185 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 60.0 | 3.85e-01 | 100.0% | 21.7% |
| 3664674 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 61.0 | 3.81e-01 | 100.0% | 32.1% |
| 3264122 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.66 | 61.0 | 3.68e-01 | 100.0% | 17.0% |
| 3454034 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 59.0 | 5.06e-01 | 98.0% | 87.1% |
| 3429080 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 56.0 | 4.56e-01 | 100.0% | 50.3% |
| 3804214 | 207.1.1.97 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_RPS2 | 0.65 | 59.0 | 4.30e-01 | 100.0% | 36.7% |
| 3260850 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.65 | 58.0 | 4.29e-01 | 100.0% | 40.0% |
| 3244220 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.63 | 58.0 | 4.51e-01 | 100.0% | 56.2% |
| 3443025 | 207.1.1.143 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 | 0.63 | 57.0 | 4.02e-01 | 100.0% | 33.3% |
| 3940319 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 57.0 | 3.92e-01 | 100.0% | 33.3% |
| 3827375 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.62 | 57.0 | 3.97e-01 | 100.0% | 34.3% |
| 3422712 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 55.0 | 3.95e-01 | 100.0% | 33.8% |
| 4200735 | 2002.1.1.236 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS | 0.57 | 47.0 | 4.12e-01 | 96.0% | 58.7% |
| 3940029 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 48.0 | 3.66e-01 | 95.0% | 47.8% |
| 3617020 | 7529.1.1.8 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Pdase_M17_N2 | 0.53 | 46.0 | 3.91e-01 | 98.0% | 89.7% |
| 3179787 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 45.0 | 3.38e-01 | 94.0% | 40.4% |
| 4021283 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.52 | 45.0 | 3.58e-01 | 96.0% | 87.1% |
| 3508348 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.51 | 36.0 | 3.39e-01 | 73.0% | 72.8% |
| 4932274 | 2002.1.1.28 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI | 0.51 | 44.0 | 3.68e-01 | 100.0% | 56.3% |
D2
medium
residues 305-354
Domain cluster:
rep: hypothetical_protein_crov114__YP_003969746__Cafeteria_roenbergensis_virus_BV-PW1__693272__D230-293
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05725.19 best | FNIP | 31.6 | 2.10e-07 | 76.0% | 72.7% |
| PF05725.19 | FNIP | 29.7 | 7.90e-07 | 62.0% | 65.9% |
D3
medium
residues 355-477
Domain cluster:
rep: FNIP_repeat-containing_protein__YP_007354770__Acanthamoeba_polyphaga_moumouvirus__1269028__D44-172
Pfam (6)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13306.13 best | LRR_5 | 30.6 | 3.80e-07 | 95.1% | 83.5% |
| PF05725.19 | FNIP | 49.3 | 5.70e-13 | 35.8% | 97.7% |
| PF05725.19 | FNIP | 50.1 | 3.30e-13 | 35.8% | 97.7% |
| PF05725.19 | FNIP | 37.8 | 2.30e-09 | 35.8% | 100.0% |
| PF05725.19 | FNIP | 45.4 | 1.00e-11 | 35.0% | 95.5% |
| PF05725.19 | FNIP | 30.4 | 4.90e-07 | 27.6% | 77.3% |
D4
medium
residues 478-580
Domain cluster:
rep: hypothetical_protein_crov511__YP_003970144__Cafeteria_roenbergensis_virus_BV-PW1__693272__D414-500
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05725.19 best | FNIP | 27.6 | 3.60e-06 | 39.8% | 90.9% |