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hypothetical_protein_crov421

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

hypothetical_protein_crov421__YP_003970054__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:
YP_003970054 ↗
Protein ID:
hypothetical_protein_crov421
Kingdom:
euk

Quality

59.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Rheavirus› Cafeteria_roenbergensis_virus_BV-PW1

TaxID: 693272

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-119
PDB
D2 high residues 123-227
PDB
Domain cluster: rep: hypothetical_protein_crov420__YP_003970053__Cafeteria_roenbergensis_virus_BV-PW1__693272__D161-244
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.73 38.0 4.31e-01 77.1% 65.4%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.67 48.0 5.37e-01 99.0% 100.0%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 49.0 4.15e-01 89.5% 48.0%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.63 37.0 3.51e-01 72.4% 48.8%
1vibA00 1.10.287.120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Neurotoxin B-IV-like 0.61 33.0 4.23e-01 85.7% 98.2%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.59 50.0 4.99e-01 94.3% 96.3%
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.59 36.0 4.41e-01 92.4% 98.5%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 37.0 3.80e-01 90.5% 67.7%
6vudA01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 50.0 4.95e-01 96.2% 96.3%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.57 32.0 3.96e-01 89.5% 89.2%
3b9wA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.57 45.0 3.12e-01 84.8% 71.0%
1sgmA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 47.0 3.88e-01 90.5% 51.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 43.0 4.28e-01 81.0% 82.7%
4mndA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.54 42.0 3.50e-01 83.8% 51.8%
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.54 37.0 3.92e-01 80.0% 81.3%
3cqcA00 1.20.190.50 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 0.54 38.0 2.93e-01 84.8% 31.2%
6f1eA01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.53 36.0 3.35e-01 83.8% 52.5%
3kkdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 46.0 3.78e-01 97.1% 53.0%
1u7gA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.53 44.0 3.11e-01 95.2% 39.2%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.51 37.0 3.83e-01 84.8% 78.4%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 3.91e-01 79.0% 95.1%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 40.0 3.88e-01 98.1% 76.7%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 45.0 4.03e-01 100.0% 100.0%
1f68A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.50 38.0 3.85e-01 88.6% 81.6%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.50 43.0 3.95e-01 93.3% 75.6%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 38.0 4.02e-01 90.5% 90.4%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3268298 633.24.1.2 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.76 56.0 5.86e-01 95.2% 85.3%
5055625 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.68 59.0 4.67e-01 97.1% 84.5%
3623422 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.66 45.0 3.20e-01 70.5% 53.2%
3274518 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.63 39.0 3.53e-01 81.9% 48.1%
3655684 7111.1.1.1 ↗ alpha bundles › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiq_cyt_C_chap 0.62 48.0 4.48e-01 97.1% 64.4%
4940643 1079.1.1.0 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA 0.61 54.0 4.25e-01 100.0% 84.9%
5020613 1075.5.1.2 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ 0.60 51.0 3.92e-01 96.2% 58.8%
3955159 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.59 51.0 4.09e-01 100.0% 48.8%
3990438 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.59 46.0 4.58e-01 96.2% 81.8%
4667179 141.1.1.0 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases 0.58 49.0 3.43e-01 94.3% 27.5%
4255398 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.58 50.0 4.12e-01 94.3% 92.6%
3937038 181.1.1.6 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PCM1_C 0.58 50.0 4.62e-01 96.2% 76.8%
4997392 3930.1.1.3 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.58 38.0 3.52e-01 100.0% 50.7%
3467691 150.5.1.76 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF1110 0.57 37.0 4.02e-01 84.8% 80.0%
4987541 611.8.1.0 ↗ alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 0.57 38.0 3.78e-01 76.2% 64.5%
5022510 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.57 45.0 4.41e-01 92.4% 78.1%
3596652 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.57 50.0 4.81e-01 100.0% 86.4%
4486453 1079.1.1.7 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › SfLAP 0.56 47.0 3.86e-01 100.0% 49.7%
3988974 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.55 38.0 3.80e-01 72.4% 68.2%
3981661 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 42.0 4.46e-01 95.2% 93.3%
4941992 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 44.0 3.15e-01 86.7% 82.2%
4097792 1002.1.1.1 ↗ alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB 0.54 45.0 4.32e-01 95.2% 76.8%
3589835 5069.1.3.26 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF1622 0.53 39.0 3.86e-01 76.2% 80.0%
3598135 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.53 34.0 3.76e-01 86.7% 78.8%
4154170 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 39.0 3.66e-01 77.1% 69.2%
4380216 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.53 35.0 3.11e-01 83.8% 47.3%
3576126 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.52 41.0 3.92e-01 94.3% 71.2%
4554168 1079.1.1.13 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp 0.52 45.0 3.87e-01 99.0% 84.0%
3414363 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.52 45.0 3.16e-01 99.0% 87.0%
4979232 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.52 35.0 3.25e-01 74.3% 53.3%
3616671 604.1.1.155 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF29142 0.51 36.0 3.81e-01 94.3% 82.1%
3227678 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.51 37.0 3.79e-01 86.7% 78.0%
3919843 604.1.1.124 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 0.51 42.0 3.97e-01 92.4% 86.9%
5066501 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.51 38.0 3.25e-01 82.9% 63.7%
3189820 601.1.1.80 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › SHR3_chaperone 0.50 39.0 3.30e-01 81.9% 97.1%
5035275 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.50 37.0 3.78e-01 85.7% 77.1%