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hypothetical_protein_crov473
Euk-VirCafeteria_roenbergensis_virus_BV-PW1
hypothetical_protein_crov473__YP_003970106__Cafeteria_roenbergensis_virus_BV-PW1__693272
Identity
- Accession:
- YP_003970106 ↗
- Protein ID:
- hypothetical_protein_crov473
- Kingdom:
- euk
Quality
72.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Rheavirus›
Cafeteria_roenbergensis_virus_BV-PW1
TaxID: 693272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-52
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.77 | 67.0 | 5.59e-01 | 100.0% | 72.4% |
| 3mzkB03 | 1.20.58.940 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 46.0 | 4.12e-01 | 98.0% | 51.4% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 54.0 | 4.10e-01 | 100.0% | 87.9% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.61 | 45.0 | 3.52e-01 | 82.0% | 74.4% |
| 4nv0A02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.61 | 41.0 | 3.58e-01 | 72.0% | 51.2% |
| 1y02A01 | 1.10.720.140 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.58 | 47.0 | 4.22e-01 | 100.0% | 65.4% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 38.0 | 3.42e-01 | 72.0% | 46.1% |
| 1n5uA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 45.0 | 3.92e-01 | 100.0% | 74.4% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 44.0 | 3.35e-01 | 100.0% | 53.6% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 35.0 | 2.81e-01 | 70.0% | 36.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3814136 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 42.0 | 4.08e-01 | 98.0% | 60.0% |
| 4239767 | 304.9.1.89 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › MLLE | 0.61 | 48.0 | 4.22e-01 | 100.0% | 62.2% |
| 3788792 | 143.1.1.1 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › PABP | 0.61 | 48.0 | 4.22e-01 | 100.0% | 62.2% |
| 3400775 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 39.0 | 3.00e-01 | 98.0% | 26.4% |
| 5051912 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.57 | 45.0 | 4.29e-01 | 100.0% | 81.5% |
| 3244180 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.56 | 45.0 | 3.02e-01 | 90.0% | 26.5% |
| 3649982 | 109.4.1.636 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_HEAT | 0.54 | 38.0 | 2.67e-01 | 78.0% | 55.1% |