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hypothetical_protein_crov509

Euk-Vir

Cafeteria_roenbergensis_virus_BV-PW1

hypothetical_protein_crov509__YP_003970142__Cafeteria_roenbergensis_virus_BV-PW1__693272

Identity

Accession:
YP_003970142 ↗
Protein ID:
hypothetical_protein_crov509
Kingdom:
euk

Quality

74.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Rheavirus› Cafeteria_roenbergensis_virus_BV-PW1

TaxID: 693272

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-121
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cmyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.72 59.0 5.01e-01 90.6% 88.0%
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 55.0 3.72e-01 100.0% 32.6%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.62 44.0 4.51e-01 74.1% 96.2%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 50.0 4.54e-01 92.9% 93.2%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.60 40.0 3.74e-01 70.6% 95.6%
1w3iA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 52.0 3.67e-01 100.0% 48.8%
3vxgA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.57 49.0 3.49e-01 100.0% 50.5%
3cprA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 49.0 3.43e-01 98.8% 48.7%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 3.45e-01 100.0% 34.2%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 49.0 3.43e-01 100.0% 40.0%
1dk8A02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.51 35.0 3.58e-01 92.9% 74.1%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3410194 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 66.0 4.53e-01 100.0% 54.1%
4221184 109.4.1.33 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT 0.70 61.0 4.49e-01 100.0% 51.7%
3940099 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 58.0 3.94e-01 100.0% 32.9%
3656389 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 57.0 3.56e-01 97.6% 51.9%
3417019 109.4.1.298 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel 0.65 57.0 4.46e-01 100.0% 63.7%
3304140 4015.1.1.1 ↗ alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.65 50.0 3.57e-01 83.5% 32.5%
3856165 109.4.1.1489 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, PPP2R1A-like_HEAT 0.64 56.0 4.14e-01 100.0% 48.7%
3405087 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 4.32e-01 100.0% 91.9%
3709547 4299.1.1.2 ↗ alpha arrays › BSD domain › BSD domain › BSD domain › DUF4476 0.62 54.0 5.35e-01 100.0% 100.0%
3855274 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.61 53.0 4.29e-01 100.0% 71.4%
3703328 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 52.0 3.79e-01 100.0% 42.4%
3276316 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 49.0 4.05e-01 95.3% 83.1%
4102862 2006.1.4.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.55 39.0 3.41e-01 76.5% 60.7%
2482262 109.4.1.275 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rgg_C 0.53 46.0 3.42e-01 96.5% 44.1%
D2 medium residues 122-180
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.70 60.0 4.78e-01 100.0% 60.8%
2ouxA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.66 55.0 4.44e-01 100.0% 58.6%
3hjlA02 1.10.220.30 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain 0.65 49.0 4.12e-01 84.7% 54.7%
5cmyA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 53.0 4.19e-01 100.0% 95.1%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.58 46.0 4.31e-01 94.9% 93.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821758 109.59.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.70 59.0 4.87e-01 100.0% 61.7%
3386338 531.2.1.1 ↗ alpha arrays › Domains of FliG › Middle domain of FliG › Middle domain of FliG › FliG_M 0.62 49.0 4.35e-01 91.5% 65.6%
3460319 109.59.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain 0.62 50.0 4.68e-01 98.3% 82.5%