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hypothetical_protein_crov536
Euk-VirCafeteria_roenbergensis_virus_BV-PW1
hypothetical_protein_crov536__YP_003970169__Cafeteria_roenbergensis_virus_BV-PW1__693272
Identity
- Accession:
- YP_003970169 ↗
- Protein ID:
- hypothetical_protein_crov536
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Imitervirales›
Mimiviridae›
Rheavirus›
Cafeteria_roenbergensis_virus_BV-PW1
TaxID: 693272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-96
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wwwC01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 59.0 | 5.90e-01 | 82.0% | 92.3% |
| 2p67A01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 62.0 | 6.16e-01 | 92.0% | 98.1% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.62 | 49.0 | 3.90e-01 | 98.0% | 41.3% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.60 | 49.0 | 4.31e-01 | 98.0% | 75.6% |
| 3ix7A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 43.0 | 3.34e-01 | 82.0% | 43.5% |
| 4oiyA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.59 | 49.0 | 4.29e-01 | 98.0% | 74.1% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 45.0 | 4.10e-01 | 86.0% | 80.6% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.57 | 45.0 | 4.18e-01 | 98.0% | 86.3% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 40.0 | 3.22e-01 | 74.0% | 41.7% |
| 1or7C00 | 1.10.10.880 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti sigma-E protein RseA, N-terminal domain | 0.56 | 44.0 | 4.07e-01 | 88.0% | 66.7% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 40.0 | 3.59e-01 | 90.0% | 85.9% |
| 1f0yA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 40.0 | 3.58e-01 | 94.0% | 88.5% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.52 | 43.0 | 3.83e-01 | 98.0% | 64.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001590 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.57 | 46.0 | 4.50e-01 | 90.0% | 94.5% |
| 3927675 | 2004.1.1.600 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn, AAA_21 | 0.53 | 40.0 | 2.37e-01 | 98.0% | 8.2% |