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hypothetical_protein_ml_175
Euk-VirMollivirus_sibericum_Viruses.
hypothetical_protein_ml_175__YP_009165141__Mollivirus_sibericum_Viruses.__X
Identity
- Accession:
- YP_009165141 ↗
- Protein ID:
- hypothetical_protein_ml_175
- Kingdom:
- euk
Quality
56.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 225-398
Domain cluster:
rep: hypothetical_protein_pmac_cds_23__YP_009480707__Pandoravirus_macleodensis__2107707__D422-484_525-668_688-706
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26128.2 best | Gad2 | 31.3 | 2.60e-07 | 80.5% | 71.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h37A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.75 | 58.0 | 6.34e-01 | 79.9% | 97.2% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 45.0 | 5.24e-01 | 76.4% | 98.4% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 48.0 | 5.39e-01 | 76.4% | 100.0% |
| 4wcwA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 41.0 | 4.96e-01 | 74.7% | 99.1% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.62 | 52.0 | 5.41e-01 | 90.8% | 96.2% |
| 2pbeA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 39.0 | 4.49e-01 | 74.7% | 89.1% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 35.0 | 4.35e-01 | 78.2% | 94.4% |
| 2dulA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 3.47e-01 | 79.9% | 65.6% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 30.0 | 3.60e-01 | 92.0% | 87.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3272557 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.86 | 76.0 | 7.53e-01 | 92.5% | 98.3% |
| 3252046 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.85 | 79.0 | 6.98e-01 | 96.0% | 91.9% |
| 3273326 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.85 | 77.0 | 6.61e-01 | 94.8% | 80.0% |
| 3274698 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.84 | 77.0 | 6.84e-01 | 96.0% | 97.9% |
| 4146108 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.84 | 55.0 | 6.77e-01 | 77.6% | 100.0% |
| 3632181 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.83 | 66.0 | 6.49e-01 | 81.6% | 87.0% |
| 3269142 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.83 | 74.0 | 7.12e-01 | 93.7% | 100.0% |
| 3250627 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.83 | 78.0 | 6.65e-01 | 99.4% | 75.8% |
| 3195886 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.83 | 78.0 | 5.98e-01 | 99.4% | 67.5% |
| 3276222 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.82 | 64.0 | 5.76e-01 | 80.5% | 99.1% |
| 4495995 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.82 | 60.0 | 6.86e-01 | 80.5% | 100.0% |
| 4156614 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.81 | 61.0 | 6.96e-01 | 79.3% | 100.0% |
| 3268750 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.80 | 74.0 | 7.47e-01 | 97.7% | 100.0% |
| 3273503 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.80 | 75.0 | 6.83e-01 | 100.0% | 88.4% |
| 3755044 | 316.1.1.40 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 | 0.70 | 54.0 | 5.07e-01 | 81.0% | 98.1% |
| 5028121 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 44.0 | 4.97e-01 | 87.9% | 85.4% |
| 1179390 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.67 | 46.0 | 5.27e-01 | 70.7% | 100.0% |
| 3498645 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 51.0 | 5.15e-01 | 81.6% | 98.9% |
| 3970660 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.64 | 42.0 | 5.04e-01 | 91.4% | 99.1% |
| 5080884 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.64 | 55.0 | 4.89e-01 | 91.4% | 95.5% |
| 1240966 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.64 | 48.0 | 4.73e-01 | 78.2% | 86.6% |
| 5068883 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.63 | 41.0 | 4.79e-01 | 72.4% | 91.2% |
| 3733909 | 316.1.1.24 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm | 0.63 | 47.0 | 4.14e-01 | 77.6% | 98.0% |
| 3947896 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.62 | 38.0 | 4.69e-01 | 70.1% | 99.0% |
| 3839079 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.62 | 54.0 | 4.90e-01 | 94.3% | 93.6% |
| 4990267 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.61 | 52.0 | 5.07e-01 | 91.4% | 97.3% |
| 5068144 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.61 | 51.0 | 5.28e-01 | 89.7% | 93.9% |
| 3957461 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.60 | 42.0 | 4.83e-01 | 89.7% | 98.4% |
| 4944346 | 316.1.1.81 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › tRNA_NucTransf2 | 0.60 | 44.0 | 4.81e-01 | 75.3% | 97.1% |
| 5040839 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.59 | 51.0 | 5.21e-01 | 92.5% | 100.0% |
| 3286195 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.59 | 52.0 | 4.68e-01 | 94.3% | 91.9% |
| 4583055 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.58 | 47.0 | 4.91e-01 | 93.1% | 92.5% |
| 3193528 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.58 | 50.0 | 4.18e-01 | 92.5% | 86.6% |
| 3941186 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.58 | 32.0 | 4.06e-01 | 89.1% | 94.7% |
| 4263916 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.56 | 48.0 | 4.80e-01 | 91.4% | 92.8% |
| 4954405 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.55 | 46.0 | 4.23e-01 | 89.1% | 93.4% |
| 4221255 | 316.1.1.25 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap_D4 | 0.55 | 41.0 | 3.84e-01 | 75.9% | 80.5% |
| 2419127 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.55 | 47.0 | 4.45e-01 | 92.5% | 81.6% |
| 4011167 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.54 | 31.0 | 4.07e-01 | 72.4% | 99.0% |
| 3950145 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.54 | 47.0 | 4.42e-01 | 94.8% | 81.4% |
| 3711594 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 38.0 | 4.16e-01 | 83.3% | 89.3% |