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hypothetical_protein_ml_315

Euk-Vir

Mollivirus_sibericum_Viruses.

hypothetical_protein_ml_315__YP_009165281__Mollivirus_sibericum_Viruses.__X

Identity

Accession:
YP_009165281 ↗
Protein ID:
hypothetical_protein_ml_315
Kingdom:
euk

Quality

61.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 323-434
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.70 45.0 4.31e-01 92.0% 57.6%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.66 45.0 3.70e-01 72.3% 39.8%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 38.0 4.19e-01 76.8% 74.4%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.62 43.0 4.59e-01 98.2% 80.8%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 41.0 4.40e-01 90.2% 77.8%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 38.0 4.53e-01 80.4% 98.7%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 45.0 4.36e-01 92.9% 74.6%
1r6vA02 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.56 33.0 3.94e-01 89.3% 84.6%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.56 42.0 4.52e-01 79.5% 99.0%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.55 42.0 4.54e-01 79.5% 95.7%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 41.0 3.92e-01 79.5% 73.3%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 40.0 4.43e-01 98.2% 100.0%
4yhbA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 40.0 3.88e-01 80.4% 94.6%
2lp6A00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.53 39.0 4.24e-01 77.7% 100.0%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 39.0 4.24e-01 80.4% 96.7%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 32.0 3.79e-01 73.2% 89.7%
3k2yA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 38.0 4.01e-01 77.7% 100.0%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3966494 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.70 47.0 4.80e-01 70.5% 70.0%
5010418 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 45.0 4.98e-01 94.6% 88.9%
5021539 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.65 36.0 2.56e-01 79.5% 18.5%
4245518 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 39.0 4.65e-01 77.7% 93.3%
109 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 42.0 4.38e-01 90.2% 76.2%
4951403 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 43.0 4.67e-01 93.8% 88.9%
4966449 1.1.13.72 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CBS 0.61 42.0 4.57e-01 92.9% 84.2%
3970830 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 43.0 4.55e-01 73.2% 93.0%
4194551 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 38.0 4.60e-01 78.6% 94.7%
4954501 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 43.0 4.54e-01 94.6% 82.0%
3602341 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 43.0 4.72e-01 94.6% 91.1%
3599398 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.60 43.0 4.57e-01 74.1% 84.0%
3698630 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.60 43.0 4.45e-01 74.1% 84.8%
4932427 1.1.8.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.59 42.0 4.65e-01 73.2% 92.2%
3252646 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.59 49.0 4.61e-01 91.1% 97.9%
3977079 1.1.12.0 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.57 38.0 3.82e-01 96.4% 65.2%
4999166 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 37.0 4.40e-01 79.5% 97.3%
3389763 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.57 41.0 4.44e-01 80.4% 87.4%
3930882 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 43.0 4.69e-01 84.8% 94.7%
3590326 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.56 43.0 4.41e-01 79.5% 100.0%
4014641 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.56 42.0 3.98e-01 77.7% 96.2%
3402456 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.56 39.0 3.19e-01 71.4% 91.3%
5073223 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 38.0 4.23e-01 82.1% 91.8%
5024154 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 38.0 4.29e-01 82.1% 94.1%
3442841 1.1.7.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding 0.55 45.0 4.62e-01 85.7% 100.0%
3205875 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 42.0 3.95e-01 79.5% 85.2%
4014463 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 3.87e-01 81.2% 90.0%
4311355 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.55 41.0 4.34e-01 77.7% 99.0%
3987212 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.55 42.0 4.30e-01 79.5% 97.1%
4222919 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.54 38.0 3.71e-01 94.6% 65.6%
3322961 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.54 40.0 4.49e-01 91.1% 97.8%
3944719 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.54 46.0 4.25e-01 91.1% 88.5%
5074909 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 39.0 4.35e-01 79.5% 98.9%
4269600 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.52 41.0 3.91e-01 95.5% 70.8%
4255707 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.52 41.0 3.80e-01 94.6% 65.7%
3810482 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.52 42.0 3.93e-01 84.8% 74.8%
4000316 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.52 41.0 4.33e-01 92.9% 96.0%
3710311 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 40.0 3.82e-01 82.1% 98.5%
3226149 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 41.0 4.09e-01 83.9% 94.8%
3953489 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.51 39.0 4.12e-01 81.2% 98.0%
3490032 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.51 40.0 3.91e-01 83.9% 97.6%
3510937 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.51 39.0 4.09e-01 82.1% 89.5%
4975627 1.1.7.13 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.51 41.0 3.79e-01 84.8% 91.4%
3710460 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.50 39.0 4.03e-01 82.1% 98.2%
D2 medium residues 44-259
PDB
D3 medium residues 465-593
PDB