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hypothetical_protein_ml_435

Euk-Vir

Mollivirus_sibericum_Viruses.

hypothetical_protein_ml_435__YP_009165401__Mollivirus_sibericum_Viruses.__X

Identity

Accession:
YP_009165401 ↗
Protein ID:
hypothetical_protein_ml_435
Kingdom:
euk

Quality

78.6 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-104
PDB
Domain cluster: rep: Ervl-Alr_family_protein__YP_009342175__Lymphocystis_disease_virus_Sa__1898060__D32-125
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04777.19 best Evr1_Alr 65.8 5.10e-18 93.9% 90.3%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gwnA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.95 88.0 8.30e-01 95.9% 88.5%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.94 87.0 8.23e-01 95.9% 84.8%
1jr8A00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.94 85.0 8.32e-01 94.9% 88.6%
3gwlA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.92 89.0 8.64e-01 100.0% 92.5%
3llkA02 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.80 71.0 6.16e-01 94.9% 86.0%
4xpwA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.66 50.0 4.60e-01 81.6% 80.9%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 43.0 3.85e-01 73.5% 75.5%
3u5nA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.59 43.0 4.08e-01 78.6% 100.0%
2xefA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.58 49.0 3.53e-01 95.9% 87.6%
3zssA02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.57 43.0 4.68e-01 80.6% 100.0%
3uo9C01 1.10.238.210 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 37.0 4.06e-01 74.5% 83.1%
4kk2B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 43.0 3.08e-01 82.7% 97.3%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.57 50.0 3.66e-01 100.0% 80.7%
1f0jA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.56 41.0 2.90e-01 77.6% 47.0%
1uyvB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.56 46.0 3.37e-01 91.8% 95.5%
4m0mA04 1.20.1270.440 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 43.0 4.14e-01 88.8% 100.0%
2r8qA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.53 45.0 3.23e-01 98.0% 71.3%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 40.0 3.86e-01 80.6% 77.0%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.51 35.0 3.11e-01 71.4% 65.3%
2qvaA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.51 39.0 3.62e-01 83.7% 85.3%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.51 39.0 4.04e-01 83.7% 100.0%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211559 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.96 90.0 7.79e-01 96.9% 68.8%
3345939 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.95 88.0 8.10e-01 95.9% 78.3%
1840998 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.95 88.0 7.70e-01 95.9% 74.1%
3172977 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.94 86.0 7.67e-01 94.9% 71.5%
3596726 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.94 87.0 8.16e-01 95.9% 83.5%
3701941 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.94 88.0 8.23e-01 96.9% 86.1%
54687 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.94 87.0 8.23e-01 95.9% 84.8%
3697926 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.94 88.0 7.22e-01 96.9% 61.4%
54681 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.93 85.0 8.26e-01 94.9% 88.6%
4024775 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.93 86.0 7.53e-01 95.9% 69.6%
135564 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.92 89.0 8.64e-01 100.0% 92.5%
3742966 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.91 82.0 7.88e-01 94.9% 84.5%
3742876 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.90 84.0 7.57e-01 96.9% 77.6%
4028825 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.84 75.0 7.18e-01 95.9% 84.5%
3902903 601.21.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr,FAD_SOX 0.82 74.0 5.33e-01 95.9% 52.0%
1822801 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.82 73.0 6.14e-01 94.9% 85.8%
3667921 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.81 73.0 5.16e-01 95.9% 48.7%
1189897 3651.1.1.1 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.63 47.0 4.31e-01 81.6% 87.6%
3711549 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 42.0 4.53e-01 74.5% 98.8%
3732973 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.58 47.0 3.83e-01 88.8% 82.6%
5027339 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.57 41.0 4.14e-01 75.5% 97.0%
3181568 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.56 46.0 3.13e-01 93.9% 59.2%
3238610 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 41.0 3.67e-01 79.6% 58.6%
3511429 109.58.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain 0.55 33.0 3.51e-01 98.0% 67.1%
3610347 103.2.1.0 ↗ alpha arrays › RuvA-C › ATP cone › ATP cone 0.55 39.0 4.14e-01 75.5% 97.6%
3527290 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 41.0 3.80e-01 80.6% 64.6%
3829747 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 42.0 3.64e-01 80.6% 58.0%
3564038 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 40.0 3.57e-01 79.6% 56.0%
3773789 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 41.0 3.56e-01 80.6% 58.0%
2841 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 40.0 3.67e-01 79.6% 63.6%
3568387 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 41.0 3.63e-01 82.7% 60.7%
3932619 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.54 40.0 3.63e-01 79.6% 63.0%
3413235 309.1.1.6 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C,Peptidase_M16_M 0.53 43.0 3.31e-01 89.8% 76.6%
3436600 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.52 42.0 3.09e-01 86.7% 39.6%
3689499 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.28e-01 100.0% 85.4%
3340747 309.1.1.8 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.50 43.0 3.21e-01 92.9% 76.2%