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hypothetical_protein_ml_488

Euk-Vir

Mollivirus_sibericum_Viruses.

hypothetical_protein_ml_488__YP_009165454__Mollivirus_sibericum_Viruses.__X

Identity

Accession:
YP_009165454 ↗
Protein ID:
hypothetical_protein_ml_488
Kingdom:
euk

Quality

61.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-136
PDB
Domain cluster: rep: IMGVR_UViG_2529292698_000003-2529292698-2529621123__D4-162
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 42.0 4.54e-01 74.1% 64.9%
2wmcA00 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.61 43.0 4.00e-01 81.5% 56.9%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 31.0 3.96e-01 88.1% 95.1%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.92e-01 100.0% 70.7%
1ajoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.86e-01 94.1% 77.8%
4o9dA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 42.0 3.05e-01 86.7% 72.6%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 26.0 3.57e-01 85.2% 94.4%
1q5qA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 47.0 3.98e-01 100.0% 71.7%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 32.0 3.89e-01 85.2% 98.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974178 331.10.2.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.61 51.0 4.99e-01 90.4% 95.2%
4032717 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.60 27.0 3.53e-01 91.1% 75.3%
5059920 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.58 31.0 3.74e-01 100.0% 77.8%
5080210 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.55 40.0 3.36e-01 74.8% 86.4%
3596775 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 42.0 4.30e-01 84.4% 95.6%
4961805 295.1.1.55 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF26414 0.53 26.0 3.21e-01 97.0% 73.8%
4024765 210.2.1.2 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.53 48.0 4.01e-01 100.0% 90.1%
2321507 5.1.5.76 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N 0.52 42.0 3.07e-01 86.7% 74.7%
3744656 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 43.0 3.05e-01 88.9% 57.9%
3889613 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 43.0 3.04e-01 88.9% 67.0%
1170463 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.51 32.0 3.82e-01 91.1% 93.4%
5055711 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.50 42.0 3.04e-01 88.9% 65.1%
D2 high residues 138-224
PDB