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hypothetical_protein_ml_48
Euk-VirMollivirus_sibericum_Viruses.
hypothetical_protein_ml_48__YP_009165014__Mollivirus_sibericum_Viruses.__X
Identity
- Accession:
- YP_009165014 ↗
- Protein ID:
- hypothetical_protein_ml_48
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 133-278
D2
medium
residues 279-423
D3
medium
residues 424-515
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.73 | 57.0 | 5.42e-01 | 85.9% | 70.8% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.68 | 51.0 | 5.27e-01 | 80.4% | 92.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 51.0 | 5.56e-01 | 84.8% | 100.0% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 45.0 | 5.14e-01 | 84.8% | 100.0% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.67 | 50.0 | 4.48e-01 | 79.3% | 63.1% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 53.0 | 5.04e-01 | 85.9% | 88.9% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 48.0 | 4.55e-01 | 77.2% | 83.2% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 49.0 | 4.81e-01 | 85.9% | 73.0% |
| 2xsbA02 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.65 | 54.0 | 4.64e-01 | 91.3% | 72.5% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 53.0 | 5.23e-01 | 88.0% | 89.8% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.64 | 57.0 | 4.79e-01 | 97.8% | 89.7% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.64 | 50.0 | 5.02e-01 | 84.8% | 93.5% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 4.31e-01 | 100.0% | 55.5% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.64 | 45.0 | 4.07e-01 | 87.0% | 54.8% |
| 2cwoA01 | 1.20.58.1200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain | 0.63 | 47.0 | 5.07e-01 | 80.4% | 97.3% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 42.0 | 4.31e-01 | 82.6% | 72.1% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.63 | 49.0 | 4.13e-01 | 100.0% | 50.3% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 46.0 | 4.27e-01 | 95.7% | 60.5% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 44.0 | 4.98e-01 | 76.1% | 100.0% |
| 3zheD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 51.0 | 4.08e-01 | 95.7% | 59.5% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.61 | 45.0 | 4.05e-01 | 77.2% | 57.9% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 50.0 | 5.18e-01 | 88.0% | 98.8% |
| 1fx8A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.60 | 51.0 | 3.80e-01 | 95.7% | 90.6% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 45.0 | 4.89e-01 | 89.1% | 98.7% |
| 1kf6A03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.59 | 48.0 | 4.46e-01 | 90.2% | 68.3% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.59 | 48.0 | 4.44e-01 | 88.0% | 71.4% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 35.0 | 3.18e-01 | 85.9% | 43.9% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.58 | 48.0 | 4.70e-01 | 97.8% | 83.5% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.57 | 46.0 | 4.12e-01 | 85.9% | 64.8% |
| 1ihgA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 47.0 | 4.08e-01 | 91.3% | 57.2% |
| 3mvcB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 49.0 | 4.17e-01 | 100.0% | 83.1% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 46.0 | 4.08e-01 | 98.9% | 85.0% |
| 3frrA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.53 | 43.0 | 3.45e-01 | 89.1% | 87.1% |
| 4mcwA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 42.0 | 3.33e-01 | 96.7% | 42.0% |
| 1hbgA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 46.0 | 3.98e-01 | 100.0% | 84.4% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 39.0 | 3.51e-01 | 88.0% | 57.0% |
| 3c8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.70e-01 | 94.6% | 65.6% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.88e-01 | 93.5% | 66.9% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.52 | 42.0 | 3.95e-01 | 91.3% | 71.4% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 45.0 | 4.08e-01 | 100.0% | 86.3% |
| 2y1vA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.27e-01 | 84.8% | 53.5% |
| 4r8zA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 39.0 | 3.02e-01 | 81.5% | 82.1% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 43.0 | 3.62e-01 | 93.5% | 74.2% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 42.0 | 3.92e-01 | 94.6% | 79.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4264903 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.73 | 50.0 | 5.29e-01 | 82.6% | 81.2% |
| 3216129 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.71 | 57.0 | 5.10e-01 | 85.9% | 66.4% |
| 4024049 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.69 | 53.0 | 5.80e-01 | 87.0% | 100.0% |
| 4991399 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 54.0 | 5.62e-01 | 84.8% | 97.6% |
| 4626953 | 604.5.1.3 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ArAE_1_C | 0.67 | 53.0 | 5.37e-01 | 84.8% | 97.8% |
| 4994654 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.66 | 50.0 | 4.61e-01 | 80.4% | 77.5% |
| 3912101 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.66 | 54.0 | 5.32e-01 | 89.1% | 91.0% |
| 3916060 | 109.4.1.1366 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DOCK_C-D_N, PF28208 | 0.66 | 58.0 | 3.51e-01 | 100.0% | 16.6% |
| 5020412 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.66 | 54.0 | 5.23e-01 | 89.1% | 81.0% |
| 3857249 | 1134.1.1.10 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › NTP_transf_7 | 0.66 | 58.0 | 5.30e-01 | 100.0% | 84.0% |
| 3534852 | 109.4.1.1182 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NTP_transf_7 | 0.66 | 58.0 | 5.28e-01 | 100.0% | 84.0% |
| 3744431 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.65 | 58.0 | 3.47e-01 | 98.9% | 15.3% |
| 3494312 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 57.0 | 3.36e-01 | 100.0% | 76.5% |
| 3249419 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 3.80e-01 | 98.9% | 26.8% |
| 5059607 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 59.0 | 4.97e-01 | 100.0% | 69.3% |
| 4024937 | 109.4.1.77 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AAR2 | 0.65 | 54.0 | 4.33e-01 | 94.6% | 45.9% |
| 3701020 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 49.0 | 5.24e-01 | 82.6% | 98.8% |
| 3208649 | 604.13.1.1 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like › USP8_dimer | 0.64 | 54.0 | 4.79e-01 | 97.8% | 63.7% |
| 4624818 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.64 | 50.0 | 5.09e-01 | 84.8% | 92.2% |
| 4970972 | 604.5.1.83 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › NfeD_membrane | 0.64 | 51.0 | 5.37e-01 | 89.1% | 100.0% |
| 3256571 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.63 | 49.0 | 4.92e-01 | 84.8% | 85.3% |
| 5024001 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.62 | 55.0 | 5.37e-01 | 100.0% | 95.0% |
| 4967017 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.61 | 47.0 | 4.33e-01 | 98.9% | 63.3% |
| 4372227 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.61 | 47.0 | 4.28e-01 | 82.6% | 64.0% |
| 3750030 | 604.12.1.15 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Mito_morph_reg | 0.60 | 48.0 | 4.91e-01 | 89.1% | 94.4% |
| 4886107 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.59 | 46.0 | 4.57e-01 | 84.8% | 83.0% |
| 4912069 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.58 | 45.0 | 4.43e-01 | 95.7% | 79.0% |
| 3530477 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 49.0 | 4.03e-01 | 95.7% | 54.3% |
| 3388463 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 43.0 | 3.80e-01 | 95.7% | 51.7% |
| 3954896 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.57 | 48.0 | 4.20e-01 | 90.2% | 66.7% |
| 3710139 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.57 | 47.0 | 4.31e-01 | 97.8% | 68.0% |
| 3964945 | 633.30.1.0 ↗ | alpha bundles › Bromodomain-like › hypothetical protein ABAYE3784 › hypothetical protein ABAYE3784 | 0.57 | 47.0 | 4.48e-01 | 93.5% | 78.7% |
| 3624216 | 616.1.1.22 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › PF28936 | 0.57 | 39.0 | 3.01e-01 | 71.7% | 32.0% |
| 3930703 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.56 | 40.0 | 3.95e-01 | 79.3% | 68.0% |
| 4977048 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 43.0 | 4.17e-01 | 89.1% | 75.7% |
| 3201716 | 622.1.1.7 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › DUF7607 | 0.55 | 41.0 | 3.95e-01 | 80.4% | 82.7% |
| 3801633 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.55 | 44.0 | 3.79e-01 | 89.1% | 71.0% |
| 3967002 | 3843.1.1.27 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › COX4_pro | 0.54 | 42.0 | 4.41e-01 | 93.5% | 90.6% |
| 4116078 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.53 | 39.0 | 4.28e-01 | 80.4% | 94.7% |
| 3997228 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.53 | 46.0 | 4.06e-01 | 100.0% | 93.6% |
| 4520363 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 38.0 | 3.84e-01 | 80.4% | 77.8% |
| 4999357 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 44.0 | 3.16e-01 | 96.7% | 44.7% |
| 165282 | 601.29.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like › DUF327 | 0.52 | 42.0 | 3.95e-01 | 91.3% | 71.4% |
| 3232051 | 604.33.1.0 ↗ | alpha bundles › Spectrin repeat-like › Repulsive guidance molecule (RGM) N-terminal domain › Repulsive guidance molecule (RGM) N-terminal domain | 0.52 | 40.0 | 3.22e-01 | 84.8% | 51.3% |
| 4610814 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.51 | 42.0 | 3.95e-01 | 92.4% | 80.9% |