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hypothetical_protein_pdul_cds_1007
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_1007__YP_008319942__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319942 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_1007
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-175
D2
high
residues 180-349
D3
medium
residues 383-464
Domain cluster:
rep: hypothetical_protein_psal_cds_820__YP_008437927__Pandoravirus_salinus__1349410__D388-490
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 50.0 | 3.48e-01 | 100.0% | 39.6% |
| 4fcaA03 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.57 | 44.0 | 3.65e-01 | 86.6% | 89.4% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 49.0 | 4.18e-01 | 100.0% | 94.2% |
| 3nfqB02 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 45.0 | 4.17e-01 | 90.2% | 88.9% |
| 4byfC01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.54 | 39.0 | 3.89e-01 | 78.0% | 94.4% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 45.0 | 4.07e-01 | 96.3% | 79.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4375416 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.57 | 41.0 | 3.05e-01 | 76.8% | 37.7% |
| 3823934 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.56 | 48.0 | 3.74e-01 | 100.0% | 76.9% |
| 3322282 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.56 | 48.0 | 3.81e-01 | 97.6% | 70.3% |
| 4002215 | 109.4.1.401 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 | 0.55 | 48.0 | 2.76e-01 | 98.8% | 14.8% |
| 3732131 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.54 | 47.0 | 3.75e-01 | 98.8% | 70.3% |
| 3606213 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.54 | 46.0 | 3.83e-01 | 97.6% | 78.1% |
| 3706842 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.21e-01 | 100.0% | 50.2% |
| 3622326 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.53 | 43.0 | 3.76e-01 | 92.7% | 86.7% |
| 4026711 | 109.4.1.21 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH | 0.53 | 42.0 | 3.63e-01 | 90.2% | 86.4% |
| 3640629 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.52 | 41.0 | 3.32e-01 | 87.8% | 64.7% |
| 3336371 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 42.0 | 3.51e-01 | 92.7% | 90.3% |