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hypothetical_protein_pdul_cds_1040

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_1040__YP_008319983__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319983 ↗
Protein ID:
hypothetical_protein_pdul_cds_1040
Kingdom:
euk

Quality

68.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-183
PDB
Domain cluster: rep: IMGVR_UViG_3300005099_000382-3300005099-Ga0072682_1113272__D609-753
D2 medium residues 222-307_321-361
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.75 60.0 4.40e-01 97.6% 33.4%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.74 61.0 4.59e-01 98.4% 37.5%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.73 65.0 4.94e-01 97.6% 43.0%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.72 59.0 4.58e-01 97.6% 41.6%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.72 63.0 4.65e-01 97.6% 38.0%
3wmyA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 58.0 4.31e-01 89.0% 73.5%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 60.0 4.44e-01 98.4% 37.4%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.68 42.0 4.99e-01 83.5% 94.0%
3akhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 61.0 4.53e-01 97.6% 42.6%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 61.0 4.43e-01 97.6% 44.4%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 62.0 4.45e-01 100.0% 55.7%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 59.0 4.36e-01 98.4% 39.3%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 61.0 4.49e-01 100.0% 69.9%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 49.0 3.56e-01 96.1% 29.2%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 50.0 3.64e-01 97.6% 30.4%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 59.0 4.49e-01 100.0% 49.8%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 37.0 4.48e-01 70.1% 90.1%
4g56D00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 49.0 3.65e-01 95.3% 34.0%
1v0fA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 56.0 4.00e-01 100.0% 38.0%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 53.0 3.57e-01 98.4% 36.3%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 52.0 3.51e-01 96.9% 45.0%
2pwwA00 3.30.310.100 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like 0.58 35.0 3.62e-01 93.7% 62.6%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.53e-01 95.3% 31.5%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 52.0 3.82e-01 100.0% 43.4%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.57 32.0 3.74e-01 85.8% 77.8%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.54 48.0 3.55e-01 100.0% 54.5%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.54 27.0 3.05e-01 89.8% 58.4%
1hkgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 31.0 3.14e-01 100.0% 54.6%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 3.82e-01 70.1% 96.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.50 34.0 3.30e-01 89.0% 60.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3637185 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.79 61.0 4.92e-01 97.6% 44.3%
1564338 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.73 65.0 4.94e-01 97.6% 43.0%
5041138 5.1.2.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF5005 0.70 60.0 4.30e-01 97.6% 33.8%
4966948 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.69 64.0 4.81e-01 99.2% 50.3%
3695422 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 53.0 4.23e-01 99.2% 40.4%
2321284 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 39.0 4.09e-01 91.3% 61.4%
3719842 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.68 56.0 4.24e-01 97.6% 37.6%
4130753 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.68 61.0 4.40e-01 97.6% 38.9%
4973405 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 61.0 4.33e-01 97.6% 87.7%
5018251 5.1.2.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 0.67 61.0 4.52e-01 98.4% 42.2%
3194649 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.67 60.0 3.82e-01 97.6% 24.1%
1388847 5.1.2.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_62 0.67 62.0 4.53e-01 100.0% 51.5%
3832530 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 54.0 3.90e-01 97.6% 31.3%
3574708 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 28.0 4.17e-01 75.6% 98.0%
4126006 325.1.7.14 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RPOC_hybrid 0.66 27.0 3.77e-01 73.2% 75.4%
3224773 5.1.4.589 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7911 0.63 57.0 4.37e-01 100.0% 93.0%
3791563 5.1.2.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF7911 0.63 56.0 4.28e-01 99.2% 94.0%
5008670 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 42.0 3.34e-01 96.9% 34.4%
3576335 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 50.0 3.66e-01 96.1% 32.6%
3493824 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 50.0 3.58e-01 96.1% 31.4%
3613801 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.61 52.0 3.73e-01 98.4% 31.9%
5012736 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.91e-01 94.5% 100.0%
3305683 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 54.0 3.85e-01 96.1% 36.2%
3468705 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 54.0 3.84e-01 100.0% 32.6%
3221976 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 54.0 3.80e-01 97.6% 44.4%
3575937 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 4.03e-01 97.6% 59.3%
3938746 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 53.0 3.75e-01 96.9% 38.9%
3426108 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.58 52.0 3.79e-01 96.9% 50.0%
4927495 5.1.3.22 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH 0.58 53.0 3.69e-01 98.4% 44.4%
3255279 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.56e-01 100.0% 33.9%
3797677 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 52.0 3.92e-01 100.0% 43.1%
3737921 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.56 50.0 3.54e-01 100.0% 53.7%
3436853 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.56 49.0 3.63e-01 97.6% 42.4%
3737835 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.55 33.0 3.65e-01 96.1% 74.0%
3721364 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.55 31.0 3.25e-01 83.5% 59.1%
3248810 5.1.4.258 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.55 49.0 3.44e-01 100.0% 38.3%
3449246 5.1.3.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.55 48.0 4.19e-01 97.6% 74.2%
4926892 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.53 38.0 4.00e-01 99.2% 82.6%
4982545 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 33.0 3.86e-01 86.6% 94.0%
4522761 3308.1.1.0 ↗ beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme 0.53 38.0 4.01e-01 86.6% 86.4%
3936609 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.53 47.0 3.29e-01 100.0% 47.1%
3433173 5.1.5.86 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 0.52 47.0 3.41e-01 100.0% 38.2%
4029107 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 46.0 3.63e-01 100.0% 45.5%
3629700 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 47.0 3.47e-01 100.0% 56.1%
3832962 5.1.3.155 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2 0.51 45.0 3.44e-01 100.0% 47.8%
4402089 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.51 44.0 2.62e-01 96.1% 16.5%
4274998 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.51 45.0 3.03e-01 100.0% 29.8%