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hypothetical_protein_pdul_cds_302

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_302__YP_009430195__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_009430195 ↗
Protein ID:
hypothetical_protein_pdul_cds_302
Kingdom:
euk

Quality

71.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-116
PDB
D2 medium residues 179-286_302-347
PDB
Domain cluster: rep: F-box_domain__YP_008437564__Pandoravirus_salinus__1349410__D85-110_149-282
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ui9Y03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 33.0 4.45e-01 76.0% 100.0%
4jxtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 48.0 5.16e-01 94.2% 97.7%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 55.0 4.64e-01 100.0% 75.6%
2vgxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 47.0 4.86e-01 95.5% 86.2%
2q7fA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 48.0 4.42e-01 95.5% 65.5%
1h2uA01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 48.0 4.07e-01 84.4% 70.2%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 47.0 4.47e-01 94.2% 69.7%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 38.0 4.52e-01 77.9% 95.0%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 46.0 4.82e-01 96.1% 88.1%
3sz7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 45.0 4.60e-01 95.5% 82.1%
1ldjA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.59 42.0 4.72e-01 85.7% 96.5%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 42.0 4.70e-01 95.5% 95.0%
2vsyA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 44.0 4.61e-01 95.5% 85.9%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 44.0 4.41e-01 94.8% 76.1%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 45.0 4.33e-01 94.8% 70.8%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 52.0 4.79e-01 96.8% 86.1%
2ho1B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 46.0 4.09e-01 95.5% 58.4%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 40.0 4.45e-01 78.6% 90.8%
3zn3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 47.0 4.04e-01 100.0% 54.5%
3gz1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 45.0 4.63e-01 94.8% 87.5%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 44.0 4.76e-01 95.5% 100.0%
3wozB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 49.0 4.34e-01 95.5% 76.9%
3tt9A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 49.0 4.31e-01 97.4% 78.1%
4ffbC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 49.0 4.29e-01 96.1% 72.7%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 49.0 3.95e-01 96.1% 52.0%
3cvpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 46.0 3.84e-01 91.6% 63.1%
5aioA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 41.0 4.16e-01 93.5% 78.1%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 40.0 4.18e-01 94.8% 85.2%
2pl2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 44.0 4.09e-01 94.8% 68.6%
3s0aA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.54 30.0 3.42e-01 98.7% 68.9%
1b89A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 44.0 3.45e-01 93.5% 41.4%
8f5oD01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 46.0 3.46e-01 94.2% 87.5%
4g1tA03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 45.0 3.94e-01 94.8% 59.1%
4gpkF02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 43.0 3.79e-01 93.5% 57.1%
1n4kA02 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.51 42.0 4.36e-01 90.3% 91.2%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211315 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.67 60.0 4.53e-01 96.1% 49.0%
3813356 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.66 51.0 3.24e-01 95.5% 16.2%
3263377 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 53.0 5.40e-01 86.4% 98.0%
5015284 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 50.0 4.90e-01 95.5% 81.2%
3678535 109.4.1.1295 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 0.61 53.0 3.92e-01 95.5% 37.4%
3425055 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.60 54.0 4.58e-01 96.1% 70.2%
3593452 109.59.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › TPR_IFT80_172 0.60 39.0 4.58e-01 90.3% 90.9%
3245775 109.4.1.662 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MEKK4_N 0.59 49.0 3.65e-01 89.0% 69.6%
3934139 109.59.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › TPR_IFT80_172 0.59 41.0 3.92e-01 94.8% 60.3%
4030510 109.4.1.1228 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_24 0.59 45.0 4.53e-01 94.2% 78.1%
5060797 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.59 44.0 4.18e-01 96.1% 64.9%
3404366 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.59 44.0 4.58e-01 94.8% 85.7%
3590183 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 42.0 4.64e-01 92.9% 95.0%
4051953 109.4.1.3099 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_11, TPR_16, TPR_19 0.58 46.0 3.60e-01 96.1% 39.1%
3991277 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 42.0 4.52e-01 94.8% 90.8%
400738 109.4.1.206 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO 0.57 44.0 4.76e-01 95.5% 100.0%
3580559 109.59.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › TPR_IFT80_172 0.57 41.0 3.94e-01 92.2% 65.3%
3844572 109.4.1.1351 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT80_172, TPR_IF140-IFT172 0.57 45.0 3.15e-01 98.7% 26.3%
3411547 109.4.1.1288 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11 0.56 42.0 3.43e-01 95.5% 40.3%
3612684 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 3.96e-01 91.6% 70.0%
2812028 109.4.1.1394 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_12 0.55 43.0 4.56e-01 96.1% 92.7%
3625666 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.55 44.0 3.14e-01 83.1% 35.3%
4954277 109.4.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3 0.54 46.0 4.76e-01 94.8% 97.2%
4507233 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 4.30e-01 97.4% 91.5%
3742528 109.4.1.282 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Pdc1_Ge1 0.54 43.0 4.44e-01 86.4% 96.6%
3490326 109.4.1.1288 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11 0.54 43.0 3.51e-01 95.5% 45.5%
3830808 109.4.1.1287 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_16 0.53 47.0 3.67e-01 98.1% 48.6%
3757874 109.4.1.1288 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11 0.52 43.0 3.55e-01 87.7% 67.3%
3341547 109.4.1.1263 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_16 0.52 44.0 3.50e-01 90.9% 94.3%
3789793 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 41.0 2.57e-01 96.8% 16.2%
3893270 109.4.1.195 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 0.52 42.0 3.24e-01 85.7% 50.6%
3812239 109.4.1.190 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6 0.52 45.0 4.23e-01 96.1% 82.6%
4012243 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 44.0 4.07e-01 93.5% 96.0%
D3 medium residues 348-408
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.77 57.0 5.47e-01 80.3% 71.8%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 55.0 5.37e-01 78.7% 79.1%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.75 57.0 3.33e-01 80.3% 12.5%
5lbmA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.75 56.0 5.06e-01 80.3% 66.3%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.75 53.0 4.95e-01 77.0% 60.5%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 57.0 4.95e-01 82.0% 93.5%
2dnxA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 5.06e-01 100.0% 83.8%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.73 48.0 5.28e-01 72.1% 83.7%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 58.0 4.22e-01 91.8% 39.8%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 55.0 5.26e-01 82.0% 76.1%
6fmhB01 1.10.3160.10 Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 0.72 55.0 3.96e-01 82.0% 31.4%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 54.0 5.07e-01 82.0% 78.7%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.72 54.0 4.30e-01 80.3% 49.2%
3hqiA02 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.72 50.0 3.83e-01 73.8% 33.6%
1yq1A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.71 53.0 4.37e-01 80.3% 68.8%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 48.0 4.95e-01 75.4% 74.1%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 53.0 5.13e-01 78.7% 79.1%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.71 59.0 5.29e-01 93.4% 90.8%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 54.0 4.46e-01 82.0% 51.4%
4d49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 51.0 3.48e-01 80.3% 24.4%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 54.0 4.49e-01 82.0% 52.4%
6whbA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 56.0 3.64e-01 88.5% 45.5%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 50.0 5.08e-01 78.7% 91.9%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.70 52.0 4.63e-01 82.0% 68.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.70 51.0 4.30e-01 82.0% 57.1%
2b6cA01 1.20.1660.10 Mainly Alpha › Up-down Bundle › ARM repeat fold › Hypothetical protein (EF3068) 0.69 51.0 4.13e-01 78.7% 50.0%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.69 52.0 4.61e-01 82.0% 56.0%
1jkvA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.69 62.0 4.32e-01 100.0% 88.3%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.69 51.0 4.66e-01 82.0% 69.4%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.68 51.0 5.04e-01 82.0% 77.6%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.68 57.0 3.62e-01 96.7% 78.8%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.67 48.0 4.70e-01 75.4% 74.2%
1kf6C00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.67 52.0 4.10e-01 85.2% 57.7%
2iakA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 58.0 4.12e-01 100.0% 52.6%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.66 55.0 5.04e-01 98.4% 91.8%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.66 54.0 4.61e-01 91.8% 66.3%
6ghmC01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 52.0 4.00e-01 86.9% 61.2%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.64 49.0 4.68e-01 83.6% 76.1%
3hl1A02 6.10.140.1530 Special › Helix non-globular › Helix Hairpins › 0.60 42.0 4.19e-01 75.4% 70.8%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.59 52.0 3.66e-01 98.4% 59.2%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.59 50.0 3.74e-01 91.8% 67.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3803663 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.80 57.0 3.74e-01 82.0% 19.2%
3886230 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.79 60.0 4.08e-01 80.3% 26.1%
3645820 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.78 55.0 4.22e-01 75.4% 33.6%
3970470 605.1.1.174 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HAMP 0.78 53.0 4.23e-01 70.5% 46.1%
3326751 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.77 59.0 3.38e-01 82.0% 9.1%
4387171 603.5.1.18 ↗ alpha bundles › STAT-like › FlgN-like › FlgN-like › Med30 0.76 58.0 4.30e-01 82.0% 37.4%
3644062 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.76 54.0 4.17e-01 82.0% 34.1%
3828651 109.4.1.621 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 0.76 60.0 4.74e-01 93.4% 42.4%
4449117 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.75 53.0 4.86e-01 73.8% 66.3%
3718408 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.75 57.0 4.69e-01 82.0% 52.7%
3517103 4992.1.1.12 ↗ extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.75 56.0 5.40e-01 80.3% 78.6%
3511712 5069.1.3.66 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › 7TM_GPCR_Srw 0.75 57.0 4.43e-01 83.6% 54.8%
3659026 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.74 55.0 3.66e-01 82.0% 20.4%
4543996 3600.1.1.1 ↗ alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD 0.74 56.0 4.67e-01 80.3% 52.4%
3613914 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.74 56.0 5.28e-01 82.0% 73.3%
3306533 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.74 53.0 4.50e-01 75.4% 46.0%
3883768 5086.1.1.101 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 0.74 56.0 4.39e-01 80.3% 63.2%
3607008 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.74 57.0 4.87e-01 82.0% 68.4%
3813220 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.74 52.0 3.39e-01 82.0% 17.0%
3302727 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.74 59.0 3.54e-01 93.4% 13.2%
3271912 5033.1.1.0 ↗ extended segments › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM › Photosystem II reaction center protein M, PsbM 0.73 54.0 4.74e-01 82.0% 57.9%
3702706 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.73 55.0 5.02e-01 80.3% 75.0%
3442732 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.73 53.0 4.17e-01 82.0% 36.9%
3980428 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.72 55.0 5.17e-01 82.0% 76.0%
3381270 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.72 54.0 3.18e-01 82.0% 10.7%
3741700 109.40.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C 0.72 52.0 4.21e-01 77.0% 53.0%
3810942 4030.1.1.10 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › PPR 0.72 56.0 5.51e-01 90.2% 80.0%
3320046 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.71 54.0 4.22e-01 82.0% 60.0%
4674 192.7.1.1 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.71 53.0 5.23e-01 80.3% 73.8%
3817317 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.71 56.0 3.10e-01 86.9% 9.1%
3741785 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.70 55.0 4.68e-01 85.2% 72.0%
4961174 5069.1.1.2 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ni_hydr_CYTB 0.70 60.0 4.02e-01 95.1% 60.4%
5049144 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 3.52e-01 82.0% 25.8%
3720488 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.70 53.0 4.13e-01 82.0% 43.8%
3246869 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.69 53.0 3.51e-01 82.0% 21.3%
4102845 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.69 59.0 4.77e-01 96.7% 66.7%
3424814 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.69 51.0 3.36e-01 82.0% 30.4%
3862607 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.68 51.0 4.04e-01 78.7% 48.3%
3451428 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.68 53.0 3.59e-01 86.9% 34.0%
3173112 1203.1.2.4 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › Vps55 0.67 58.0 4.58e-01 100.0% 74.8%
3340780 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.67 59.0 3.68e-01 100.0% 85.9%
3774397 150.5.1.67 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › NEDD4_Bsd2 0.67 56.0 4.81e-01 96.7% 58.9%
3410365 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.67 55.0 3.38e-01 93.4% 16.8%
3314756 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.67 52.0 3.95e-01 86.9% 51.3%
5007978 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.66 49.0 3.89e-01 82.0% 59.3%
3938107 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 51.0 3.64e-01 85.2% 34.1%
4192656 109.4.1.1780 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29347 0.64 57.0 3.48e-01 98.4% 90.1%
5048976 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 56.0 4.32e-01 100.0% 48.3%
3377749 3843.1.1.15 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › ETR1_N 0.62 53.0 4.53e-01 96.7% 85.0%
3396795 601.1.1.43 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Serendipity_A 0.60 51.0 4.24e-01 98.4% 67.8%
3614039 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.58 43.0 2.56e-01 83.6% 76.1%
3757282 3352.1.1.25 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PIG-U 0.58 49.0 3.00e-01 98.4% 15.7%
4176828 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.57 41.0 4.00e-01 77.0% 72.9%
D4 medium residues 443-541
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ijeS00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.75 65.0 4.93e-01 96.0% 57.4%
5dlqB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 66.0 4.30e-01 100.0% 30.3%
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.73 66.0 6.03e-01 100.0% 80.9%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 62.0 5.89e-01 96.0% 95.7%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 62.0 4.83e-01 100.0% 50.0%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.69 50.0 4.72e-01 80.8% 62.5%
2b1eA04 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.66 50.0 4.61e-01 79.8% 83.5%
2lahA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 51.0 4.44e-01 92.9% 54.4%
1dgfA03 1.20.1370.60 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › 0.64 46.0 4.45e-01 75.8% 81.6%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 52.0 4.92e-01 87.9% 98.3%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 58.0 4.65e-01 100.0% 71.6%
3ma5A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 51.0 5.33e-01 96.0% 96.7%
1q2zA00 1.25.40.240 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain 0.63 55.0 5.25e-01 98.0% 95.8%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 53.0 4.22e-01 93.9% 60.6%
3fiwA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 45.0 4.26e-01 73.7% 81.2%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 54.0 4.66e-01 96.0% 82.4%
1kz7A01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.63 47.0 3.82e-01 79.8% 66.3%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.62 46.0 4.22e-01 78.8% 89.6%
2wviA00 1.25.40.430 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 48.0 4.14e-01 89.9% 51.9%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 52.0 4.96e-01 97.0% 79.1%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 52.0 4.28e-01 98.0% 70.8%
4epzA00 1.25.40.810 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ 0.60 51.0 4.49e-01 94.9% 93.5%
6fbtA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.60 43.0 4.74e-01 81.8% 98.7%
1vb5A01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.60 42.0 4.29e-01 72.7% 78.7%
4jgiA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.59 42.0 4.62e-01 74.7% 100.0%
3qkyA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 51.0 3.84e-01 97.0% 40.2%
3egqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 45.0 3.84e-01 81.8% 78.7%
1wy6A00 1.25.40.350 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 52.0 4.49e-01 100.0% 72.3%
4n5cD06 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 48.0 4.62e-01 97.0% 82.3%
3a52A01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.56 49.0 3.44e-01 97.0% 43.8%
4me9B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 40.0 3.34e-01 78.8% 77.4%
6vvoC03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.54 32.0 3.34e-01 93.9% 62.6%
4g9qA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.54 47.0 3.64e-01 100.0% 50.0%
4rg9B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 46.0 3.98e-01 100.0% 72.5%
1fx8A00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.53 44.0 3.41e-01 94.9% 83.1%
5ojcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.37e-01 76.8% 72.1%
2d2mD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.40e-01 75.8% 66.2%
1x9fA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.43e-01 77.8% 67.3%
4gycA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 45.0 3.53e-01 96.0% 65.9%
2gnxA01 1.10.3450.30 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › 0.52 46.0 3.85e-01 100.0% 91.1%
3wctD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.35e-01 77.8% 67.3%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 39.0 3.83e-01 83.8% 97.3%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.50 27.0 3.07e-01 75.8% 68.5%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.50 43.0 4.02e-01 96.0% 90.6%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3614863 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 66.0 4.60e-01 98.0% 46.3%
3411154 109.4.1.139 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hyccin 0.74 65.0 4.58e-01 96.0% 41.6%
3414171 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.74 66.0 5.46e-01 100.0% 67.2%
3273624 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.73 60.0 5.77e-01 89.9% 78.2%
3619810 109.25.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN 0.72 63.0 6.02e-01 96.0% 96.5%
4881789 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.72 56.0 5.92e-01 82.8% 98.9%
3615254 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 63.0 4.38e-01 100.0% 64.1%
3627331 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.70 49.0 4.32e-01 72.7% 56.6%
3348366 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.67 56.0 4.27e-01 97.0% 39.1%
3992980 109.2.1.54 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Ribophorin_II 0.67 59.0 4.38e-01 96.0% 59.2%
5057341 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 56.0 4.27e-01 94.9% 44.0%
3617789 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 55.0 4.29e-01 91.9% 42.9%
3404736 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.64 55.0 4.23e-01 93.9% 92.4%
1289949 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 58.0 4.65e-01 100.0% 71.6%
3719674 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 54.0 4.36e-01 96.0% 68.8%
5068379 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 5.27e-01 92.9% 89.5%
3359828 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.63 52.0 4.39e-01 100.0% 52.0%
3829617 109.4.1.1304 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_10, TPR_12 0.62 54.0 4.30e-01 96.0% 85.5%
4174064 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 53.0 5.09e-01 96.0% 81.7%
3653495 109.4.1.1320 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10, TPR_12 0.62 54.0 4.23e-01 99.0% 63.5%
1291256 109.4.1.1290 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 0.60 50.0 4.89e-01 100.0% 82.1%
4169813 185.1.1.5 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Gliadin 0.60 45.0 4.38e-01 79.8% 90.9%
3194235 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 47.0 4.82e-01 87.9% 94.7%
3871111 206.1.1.262 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I 0.59 51.0 3.22e-01 99.0% 17.3%
3495400 109.4.1.2243 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29386 0.58 51.0 3.34e-01 100.0% 43.6%
3518542 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.51 37.0 3.11e-01 75.8% 60.6%
D5 medium residues 542-647
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_246__YP_009482937__Pandoravirus_quercus__2107709__D564-643