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hypothetical_protein_pdul_cds_485
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_485__YP_008319234__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319234 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_485
- Kingdom:
- euk
Quality
70.4
mean pLDDT
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-185
D2
high
residues 235-387
D3
high
residues 394-513
Domain cluster:
rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 37.0 | 4.24e-01 | 100.0% | 85.7% |
| 1nf1A02 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.56 | 40.0 | 3.58e-01 | 74.2% | 99.4% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.56 | 40.0 | 3.67e-01 | 73.3% | 90.5% |
| 2ovjA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.55 | 42.0 | 3.60e-01 | 80.8% | 93.0% |
| 2v7kA01 | 1.20.58.1320 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 39.0 | 4.03e-01 | 75.0% | 84.3% |
| 3byiD00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.54 | 39.0 | 3.35e-01 | 76.7% | 86.1% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.53 | 38.0 | 3.25e-01 | 73.3% | 85.6% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 32.0 | 3.63e-01 | 99.2% | 81.6% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.52 | 43.0 | 3.76e-01 | 92.5% | 85.1% |
| 4rm7A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 40.0 | 3.82e-01 | 100.0% | 71.2% |
| 2fuqA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.50 | 43.0 | 3.21e-01 | 95.8% | 97.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3324524 | 601.1.1.64 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › All-alpha_MIP2 | 0.58 | 42.0 | 3.38e-01 | 75.8% | 57.6% |
| 3504131 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.55 | 49.0 | 3.63e-01 | 100.0% | 85.0% |
| 3696966 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.55 | 41.0 | 3.02e-01 | 79.2% | 43.0% |
| 3829191 | 109.4.1.361 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPH3 | 0.55 | 39.0 | 3.00e-01 | 73.3% | 40.0% |
| 3755299 | 196.1.1.0 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS | 0.54 | 45.0 | 4.32e-01 | 92.5% | 85.0% |
| 5034764 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.53 | 44.0 | 3.82e-01 | 94.2% | 94.6% |
| 3489206 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 48.0 | 3.51e-01 | 100.0% | 89.2% |
| 4954357 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.52 | 39.0 | 2.90e-01 | 80.0% | 34.3% |
| 3764955 | 106.1.1.13 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › FWWh | 0.51 | 39.0 | 3.65e-01 | 80.8% | 83.9% |
| 3282705 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 39.0 | 3.51e-01 | 80.8% | 90.0% |
| 3396455 | 109.4.1.1401 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_RPAP1 | 0.50 | 37.0 | 3.06e-01 | 76.7% | 64.5% |