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hypothetical_protein_pdul_cds_547

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_547__YP_008319327__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319327 ↗
Protein ID:
hypothetical_protein_pdul_cds_547
Kingdom:
euk

Quality

75.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 55-272
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5bz1A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.69 63.0 5.27e-01 99.5% 85.7%
3bwtA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.65 58.0 5.08e-01 98.2% 84.7%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 57.0 5.46e-01 95.4% 94.3%
1juqC00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 40.0 4.81e-01 70.6% 95.3%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 47.0 4.95e-01 80.7% 100.0%
4c9bB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 53.0 4.89e-01 100.0% 74.4%
1qqeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 52.0 4.83e-01 96.8% 87.9%
3wozB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 50.0 4.93e-01 91.7% 98.3%
1ihgA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 34.0 4.05e-01 94.5% 84.1%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 52.0 4.70e-01 99.1% 98.0%
5cl3A00 1.25.10.90 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.57 46.0 4.55e-01 83.9% 100.0%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 51.0 4.76e-01 98.6% 81.4%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 52.0 4.05e-01 100.0% 45.3%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 50.0 4.26e-01 99.5% 85.1%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 42.0 4.58e-01 95.0% 96.1%
2q7fA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 46.0 4.79e-01 100.0% 99.0%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 39.0 4.22e-01 71.6% 85.2%
5jjxA01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 44.0 4.05e-01 92.7% 63.6%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 33.0 4.10e-01 70.2% 100.0%
6idxA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 44.0 4.47e-01 88.1% 97.7%
3n71A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 39.0 3.99e-01 75.7% 76.5%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 39.0 4.27e-01 97.2% 93.8%
4kx7A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.52 41.0 3.62e-01 82.1% 59.8%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 39.0 4.09e-01 84.9% 87.0%
1w3bB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 43.0 3.71e-01 100.0% 53.8%
1kt1A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 37.0 4.16e-01 93.1% 99.4%
1hzfA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 38.0 3.46e-01 76.6% 68.2%
2pftA00 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.50 45.0 3.44e-01 98.2% 70.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3595164 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 62.0 5.14e-01 100.0% 78.2%
3671313 109.26.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › ELYS 0.65 55.0 5.06e-01 89.4% 83.6%
5012823 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 59.0 4.79e-01 98.2% 63.2%
3210379 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.63 58.0 3.69e-01 100.0% 49.2%
3608090 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 48.0 4.69e-01 79.4% 85.1%
3805407 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.60 44.0 4.72e-01 82.6% 87.6%
3724275 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.60 54.0 4.15e-01 100.0% 43.1%
3296486 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.60 51.0 3.83e-01 91.3% 40.9%
3666437 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.59 55.0 5.07e-01 100.0% 84.0%
3682206 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.59 51.0 4.97e-01 93.1% 90.2%
3807822 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.58 38.0 4.42e-01 78.4% 94.7%
3825686 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.57 43.0 4.08e-01 89.0% 64.2%
3812739 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.56 51.0 4.42e-01 100.0% 73.7%
3323491 109.4.1.1979 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP72, SRP_TPR_like 0.56 51.0 3.80e-01 100.0% 38.2%
3464656 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 38.0 4.40e-01 88.1% 98.0%
3423594 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.56 50.0 4.84e-01 98.2% 87.2%
162075 109.4.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.56 48.0 4.53e-01 94.5% 86.5%
3671849 109.4.1.2676 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, TPR_14, TPR_19, PF29376 0.56 50.0 3.57e-01 99.5% 36.5%
3993835 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 51.0 3.82e-01 100.0% 51.9%
3663471 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 50.0 4.55e-01 100.0% 88.0%
None — 0.54 47.0 4.51e-01 99.5% 81.2%
3813705 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 45.0 4.11e-01 96.8% 65.0%
3457282 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 48.0 4.47e-01 98.2% 84.6%
3362227 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 38.0 4.27e-01 86.2% 94.1%
3444801 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.53 48.0 3.39e-01 100.0% 30.7%
3717538 109.4.1.1201 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RESC6 0.53 47.0 4.76e-01 97.2% 98.6%
3709427 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 3.81e-01 72.9% 87.6%
3678860 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 46.0 3.60e-01 93.6% 45.7%
3462882 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 43.0 3.38e-01 85.3% 93.8%
3458100 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.52 48.0 4.19e-01 100.0% 81.2%
3363286 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.52 37.0 4.17e-01 95.4% 97.0%
3301952 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.52 42.0 4.35e-01 100.0% 90.0%
3229065 109.4.1.669 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8,TTC7_N 0.52 47.0 3.33e-01 99.5% 68.1%
3829382 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.52 42.0 3.13e-01 83.9% 34.3%
3606136 109.4.1.194 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.51 45.0 4.03e-01 96.3% 78.1%
3298612 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.51 42.0 4.29e-01 100.0% 90.5%
3428211 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.51 43.0 3.42e-01 96.3% 43.4%
3582570 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 4.15e-01 97.7% 75.5%
3460915 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.50 45.0 3.72e-01 100.0% 52.7%
3742246 109.4.1.1511 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, M-HEAT_ATR 0.50 45.0 3.48e-01 95.9% 46.3%
3596136 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 3.41e-01 98.6% 44.2%
3450893 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.50 45.0 3.88e-01 100.0% 61.7%