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hypothetical_protein_pdul_cds_613

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_613__YP_008319408__Pandoravirus_dulcis__1349409

Identity

Accession:: YP_008319408 ↗
Protein ID:: hypothetical_protein_pdul_cds_613
Kingdom:: euk

Quality

70.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (72 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 70-206_274-296

PDB

Domain cluster: rep: hypothetical_protein_pqer_cds_535__YP_009483226__Pandoravirus_quercus__2107709__D12-157

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6julA02	3.30.1490.100	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain	0.59	35.0	4.39e-01	78.1%	96.9%
1mhnA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.54	22.0	3.46e-01	75.6%	100.0%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4576993	3843.1.1.1 ↗	alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2	0.66	30.0	3.96e-01	70.6%	75.6%
5077969	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	33.0	4.47e-01	73.1%	100.0%
4420173	4.1.1.43 ↗	beta barrels › SH3 › SH3 › SH3 › SMN_Tudor	0.57	26.0	3.64e-01	86.9%	89.3%
3576438	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	26.0	3.36e-01	83.1%	78.9%
3580789	220.1.1.1 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH	0.54	31.0	3.46e-01	70.0%	71.7%
3409299	4.1.1.43 ↗	beta barrels › SH3 › SH3 › SH3 › SMN_Tudor	0.54	23.0	3.12e-01	76.9%	76.2%
3520654	4.1.1.187 ↗	beta barrels › SH3 › SH3 › SH3 › DIRP	0.52	33.0	3.44e-01	73.8%	66.7%
3226844	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	25.0	3.32e-01	83.7%	86.3%
3938389	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.52	26.0	3.36e-01	84.4%	85.9%
3393347	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.52	26.0	3.35e-01	85.6%	83.3%
3504417	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.52	25.0	3.25e-01	86.3%	81.1%
4026282	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.51	26.0	3.38e-01	86.3%	85.6%
3339169	4.1.1.415 ↗	beta barrels › SH3 › SH3 › SH3 › PNPOx_N	0.51	27.0	3.56e-01	76.2%	94.1%
1391581	4.1.1.34 ↗	beta barrels › SH3 › SH3 › SH3 › MBT	0.51	23.0	2.96e-01	72.5%	69.9%
3514191	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.51	30.0	3.66e-01	70.6%	93.0%

D2 medium residues 207-273_297-342

PDB

Domain cluster: rep: hypothetical_protein_pqer_cds_535__YP_009483226__Pandoravirus_quercus__2107709__D173-202_243-292