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hypothetical_protein_pdul_cds_614

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_614__YP_008319409__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319409 ↗
Protein ID:
hypothetical_protein_pdul_cds_614
Kingdom:
euk

Quality

71.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 323-438
PDB
Domain cluster: rep: hypothetical_protein_pneo_cds_529__YP_009482139__Pandoravirus_neocaledonia__2107708__D177-292
D2 high residues 484-600
PDB
Domain cluster: rep: hypothetical_protein_pdul_cds_616__YP_008319411__Pandoravirus_dulcis__1349409__D463-608
D3 medium residues 1-100
PDB
Domain cluster: rep: hypothetical_protein_pqer_cds_556__YP_009483247__Pandoravirus_quercus__2107709__D11-93
D4 medium residues 120-230_246-322
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b5iB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 24.0 3.32e-01 91.5% 62.8%
8hi1E01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 19.0 2.81e-01 96.3% 58.6%
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.56 30.0 3.83e-01 77.1% 87.3%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.54 30.0 3.55e-01 100.0% 77.6%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 33.0 3.86e-01 96.3% 85.0%
3rlsB00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.52 33.0 3.68e-01 89.4% 81.9%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 25.0 3.35e-01 86.7% 84.6%
2ctfA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.50 22.0 2.95e-01 100.0% 75.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027528 929.1.1.0 ↗ beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.56 21.0 2.88e-01 88.3% 64.4%
4683271 327.16.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N 0.54 22.0 3.57e-01 100.0% 100.0%
3226640 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 20.0 2.67e-01 92.0% 61.6%
4026729 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.52 25.0 2.84e-01 90.4% 57.9%
4029258 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.51 20.0 3.39e-01 97.9% 100.0%
3725920 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.51 27.0 3.63e-01 90.4% 100.0%