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hypothetical_protein_pdul_cds_657
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_657__YP_008319472__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319472 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_657
- Kingdom:
- euk
Quality
67.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 192-293_374-430
Domain cluster:
rep: hypothetical_protein_TW95_gp1591__YP_009120560__Pandoravirus_inopinatum__1605721__D181-198_210-259_277-315_339-420
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.62 | 32.0 | 3.50e-01 | 91.2% | 59.4% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.59 | 31.0 | 3.90e-01 | 89.3% | 84.2% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.52 | 39.0 | 4.05e-01 | 100.0% | 82.4% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 32.0 | 3.59e-01 | 82.4% | 86.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3454372 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.63 | 35.0 | 4.29e-01 | 94.3% | 85.0% |
| 5031081 | 243.3.1.59 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO | 0.57 | 25.0 | 3.37e-01 | 79.2% | 78.8% |
| 5080172 | 243.3.1.59 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GvpO | 0.56 | 25.0 | 3.33e-01 | 81.8% | 76.5% |
| 3801224 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 31.0 | 3.46e-01 | 98.1% | 70.2% |
| 3337433 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.54 | 26.0 | 3.72e-01 | 71.1% | 93.8% |
| 4311344 | 4252.1.1.13 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF27123 | 0.52 | 35.0 | 4.08e-01 | 96.2% | 94.8% |
| 4330226 | 4252.1.1.13 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF27123 | 0.52 | 35.0 | 4.12e-01 | 96.2% | 99.1% |
| 3212409 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 33.0 | 3.50e-01 | 97.5% | 71.0% |
| 5070365 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.93e-01 | 96.9% | 98.0% |
| 3996014 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 27.0 | 3.33e-01 | 94.3% | 80.0% |
D2
high
residues 442-545
D3
medium
residues 33-159