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hypothetical_protein_pdul_cds_674
Euk-VirPandoravirus_dulcis
hypothetical_protein_pdul_cds_674__YP_008319493__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319493 ↗
- Protein ID:
- hypothetical_protein_pdul_cds_674
- Kingdom:
- euk
Quality
74.6
mean pLDDT
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-124
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.75 | 31.0 | 3.82e-01 | 100.0% | 58.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.69 | 36.0 | 4.08e-01 | 100.0% | 66.7% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.57 | 32.0 | 3.73e-01 | 94.8% | 78.2% |
| 3anwA02 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.52 | 25.0 | 2.82e-01 | 71.4% | 53.4% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 40.0 | 2.81e-01 | 87.0% | 93.4% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 35.0 | 3.60e-01 | 75.3% | 75.3% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 3.01e-01 | 75.3% | 76.6% |
| 1uwvA03 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 36.0 | 3.11e-01 | 77.9% | 98.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3515285 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.74 | 30.0 | 4.46e-01 | 100.0% | 96.7% |
| 4021926 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.62 | 35.0 | 3.80e-01 | 74.0% | 66.2% |
| 5024226 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.61 | 28.0 | 3.47e-01 | 92.2% | 66.7% |
| 2754226 | 4043.1.1.1 ↗ | a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 0.58 | 36.0 | 3.13e-01 | 88.3% | 38.8% |
| 3701763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 30.0 | 3.70e-01 | 75.3% | 97.5% |
| 5054775 | 4043.1.1.2 ↗ | a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_7 | 0.53 | 32.0 | 2.85e-01 | 89.6% | 38.3% |
| 3968343 | 5.1.3.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SdiA-regulated | 0.53 | 45.0 | 3.18e-01 | 100.0% | 81.5% |
| 1223288 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.52 | 34.0 | 3.59e-01 | 89.6% | 79.4% |
| 3805357 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 44.0 | 3.14e-01 | 100.0% | 93.3% |
| 185631 | 5.1.4.26 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Reg_prop | 0.50 | 42.0 | 2.94e-01 | 100.0% | 91.3% |