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hypothetical_protein_pdul_cds_679

Euk-Vir

Pandoravirus_dulcis

hypothetical_protein_pdul_cds_679__YP_008319499__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319499 ↗
Protein ID:
hypothetical_protein_pdul_cds_679
Kingdom:
euk

Quality

71.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 499-624
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp0723__YP_009119692__Pandoravirus_inopinatum__1605721__D410-530
D2 medium residues 153-316
PDB
D3 medium residues 317-446
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5aarA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 56.0 5.00e-01 100.0% 65.9%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.61 55.0 5.23e-01 100.0% 92.9%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.61 55.0 4.16e-01 100.0% 41.6%
1cm5A00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.58 50.0 3.16e-01 96.9% 78.9%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.57 40.0 4.47e-01 79.2% 95.0%
3qmlD00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 48.0 3.87e-01 100.0% 57.1%
3wctD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 39.0 3.77e-01 73.8% 93.2%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 38.0 3.68e-01 74.6% 84.6%
3c07B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 39.0 3.32e-01 76.9% 75.7%
1jr3C02 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.51 36.0 3.75e-01 76.9% 77.9%
2lniA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 40.0 4.00e-01 98.5% 83.5%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.50 37.0 3.64e-01 77.7% 93.8%
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.50 30.0 3.38e-01 100.0% 75.5%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4349221 109.3.1.166 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.69 60.0 4.97e-01 100.0% 54.2%
3272965 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.67 51.0 5.60e-01 100.0% 99.0%
3783971 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 61.0 4.91e-01 100.0% 74.0%
3724271 109.4.1.757 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS51_Exo84_N 0.62 49.0 3.21e-01 85.4% 37.9%
3611582 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 51.0 4.62e-01 93.1% 86.6%
3209386 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 53.0 3.42e-01 100.0% 50.9%
4976770 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.59 40.0 4.60e-01 76.9% 98.9%
3271594 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 47.0 3.58e-01 98.5% 34.1%
3317356 109.4.1.1384 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_long 0.59 51.0 3.63e-01 96.9% 32.5%
3714692 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 51.0 3.66e-01 100.0% 37.6%
3645686 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.58 51.0 4.37e-01 100.0% 60.5%
3717301 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 46.0 3.39e-01 86.2% 44.7%
5002850 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.58 37.0 4.25e-01 80.0% 89.5%
3442109 109.4.1.18 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA 0.57 51.0 3.88e-01 100.0% 41.2%
3365101 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 41.0 4.35e-01 100.0% 85.2%
3748781 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 50.0 4.39e-01 100.0% 67.2%
3669311 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.55 48.0 3.97e-01 100.0% 51.2%
3479710 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 3.65e-01 100.0% 67.4%
4487472 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.54 37.0 3.76e-01 100.0% 69.2%
5044690 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.54 39.0 3.32e-01 76.9% 90.5%
3675485 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.53 46.0 4.16e-01 94.6% 85.1%
3878699 109.4.1.264 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 0.52 47.0 3.46e-01 100.0% 43.4%
3600771 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 45.0 3.94e-01 100.0% 62.3%
2528002 4250.1.1.1 ↗ alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding 0.52 45.0 3.61e-01 97.7% 72.9%
3810327 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.52 45.0 2.83e-01 100.0% 17.2%
4060037 109.4.1.264 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 0.52 46.0 3.67e-01 100.0% 56.7%
3829191 109.4.1.361 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NPH3 0.51 44.0 3.59e-01 99.2% 53.8%
3495691 109.4.1.264 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 0.51 45.0 3.79e-01 100.0% 85.7%
3630678 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.50 44.0 4.02e-01 96.2% 77.1%